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Tytuł :
A database resource and online analysis tools for coronaviruses on a historical and global scale.
Autorzy :
Zhu Z; School of Life Sciences, Chongqing University, No. 55 Daxuecheng South Rd., Shapingba, Chongqing, 401331, China.
Meng K; College of Veterinary Medicine, China Agricultural University, HaiDian District, Beijing, 100094, China.
Liu G; School of Life Sciences, Chongqing University, No. 55 Daxuecheng South Rd., Shapingba, Chongqing, 401331, China.
Meng G; College of Veterinary Medicine, China Agricultural University, HaiDian District, Beijing, 100094, China.
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Źródło :
Database : the journal of biological databases and curation [Database (Oxford)] 2021 Aug 05; Vol. 2020.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Databases, Genetic*
Genes, Viral*
Genome, Viral*
Proteome*
COVID-19/*virology
SARS-CoV-2/*pathogenicity
Viral Proteins/*genetics
Viral Proteins/*metabolism
Animals ; COVID-19/diagnosis ; COVID-19/epidemiology ; COVID-19/therapy ; Data Mining ; Databases, Protein ; Evolution, Molecular ; Gene Expression Regulation, Viral ; Humans ; Internet ; Phylogeny ; Protein Conformation ; SARS-CoV-2/genetics ; SARS-CoV-2/metabolism ; Structure-Activity Relationship
Czasopismo naukowe
Tytuł :
Exploring Chemical Information in PubChem.
Autorzy :
Kim S; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland.
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Źródło :
Current protocols [Curr Protoc] 2021 Aug; Vol. 1 (8), pp. e217.
Typ publikacji :
Journal Article
MeSH Terms :
Databases, Chemical*
Information Storage and Retrieval*
Biological Assay ; Databases, Factual ; Proteins ; United States
Czasopismo naukowe
Tytuł :
TCM-Blast for traditional Chinese medicine genome alignment with integrated resources.
Autorzy :
Chen Z; School of Chinese Materia Medica, Beijing University of Chinese Medicine, Yangguang South Avenue, Fangshan District, Beijing, 102488, China. .; Research Center of TCM-Information Engineering, State Administration of Traditional Chinese Medicine of The Peoples Republic of China, Yangguang South Avenue, Fangshan District, Beijing, 102488, China. .
Li J; School of Chinese Materia Medica, Beijing University of Chinese Medicine, Yangguang South Avenue, Fangshan District, Beijing, 102488, China.; Research Center of TCM-Information Engineering, State Administration of Traditional Chinese Medicine of The Peoples Republic of China, Yangguang South Avenue, Fangshan District, Beijing, 102488, China.
Hou N; School of Chinese Materia Medica, Beijing University of Chinese Medicine, Yangguang South Avenue, Fangshan District, Beijing, 102488, China.; Research Center of TCM-Information Engineering, State Administration of Traditional Chinese Medicine of The Peoples Republic of China, Yangguang South Avenue, Fangshan District, Beijing, 102488, China.
Zhang Y; School of Chinese Materia Medica, Beijing University of Chinese Medicine, Yangguang South Avenue, Fangshan District, Beijing, 102488, China.; Research Center of TCM-Information Engineering, State Administration of Traditional Chinese Medicine of The Peoples Republic of China, Yangguang South Avenue, Fangshan District, Beijing, 102488, China.
Qiao Y; School of Chinese Materia Medica, Beijing University of Chinese Medicine, Yangguang South Avenue, Fangshan District, Beijing, 102488, China. .; Research Center of TCM-Information Engineering, State Administration of Traditional Chinese Medicine of The Peoples Republic of China, Yangguang South Avenue, Fangshan District, Beijing, 102488, China. .
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Źródło :
BMC plant biology [BMC Plant Biol] 2021 Jul 17; Vol. 21 (1), pp. 339. Date of Electronic Publication: 2021 Jul 17.
Typ publikacji :
Evaluation Study; Journal Article
MeSH Terms :
DNA, Plant*
Databases, Genetic*
Genome, Plant*
Medicine, Chinese Traditional*
Plants, Medicinal/*genetics
Databases, Nucleic Acid ; Internet ; Plant Proteins/genetics ; Sequence Alignment ; User-Computer Interface
Czasopismo naukowe
Tytuł :
The COVID-19 Data Portal: accelerating SARS-CoV-2 and COVID-19 research through rapid open access data sharing.
Autorzy :
Harrison PW; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Lopez R; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Rahman N; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Allen SG; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Aslam R; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Buso N; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Cummins C; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Fathy Y; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Felix E; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Glont M; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Jayathilaka S; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Kadam S; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Kumar M; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Lauer KB; ELIXIR, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Malhotra G; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Mosaku A; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Edbali O; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Park YM; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Parton A; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Pearce M; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Estrada Pena JF; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Rossetto J; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Russell C; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Selvakumar S; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Sitjà XP; ELIXIR, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Sokolov A; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Thorne R; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Ventouratou M; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Walter P; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Yordanova G; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Zadissa A; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Cochrane G; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Blomberg N; ELIXIR, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Apweiler R; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
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Źródło :
Nucleic acids research [Nucleic Acids Res] 2021 Jul 02; Vol. 49 (W1), pp. W619-W623.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Biomedical Research*
COVID-19*/epidemiology
COVID-19*/genetics
COVID-19*/virology
Databases, Factual*
Datasets as Topic*
Information Dissemination*
Open Access Publishing*
SARS-CoV-2*/chemistry
SARS-CoV-2*/genetics
SARS-CoV-2*/metabolism
SARS-CoV-2*/ultrastructure
Databases, Bibliographic ; Disease Outbreaks ; Humans ; Pandemics ; Time Factors ; Viral Proteins/chemistry ; Viral Proteins/genetics
Czasopismo naukowe
Tytuł :
The role of phenotype-based search approaches using public online databases in diagnostics of Mendelian disorders.
Autorzy :
Fellner A; Raphael Recanati Genetics Institute, Rabin Medical Center, Beilinson Hospital, Petah Tikva, Israel. .; The Neurology Department, Rabin Medical Center, Beilinson Hospital, Petah Tikva, Israel. .
Ruhrman-Shahar N; Raphael Recanati Genetics Institute, Rabin Medical Center, Beilinson Hospital, Petah Tikva, Israel.; Sackler Faculty of Medicine, Tel-Aviv University, Tel-Aviv, Israel.
Orenstein N; Sackler Faculty of Medicine, Tel-Aviv University, Tel-Aviv, Israel.; Pediatric Genetics Clinic, Schneider Children's Medical Center of Israel, Petah Tikva, Israel.
Lidzbarsky G; Raphael Recanati Genetics Institute, Rabin Medical Center, Beilinson Hospital, Petah Tikva, Israel.
Shuldiner AR; Regeneron Genetics Center, Tarrytown, NY, USA.
Gonzaga-Jauregui C; Regeneron Genetics Center, Tarrytown, NY, USA.
Brown-Shalev H; Raphael Recanati Genetics Institute, Rabin Medical Center, Beilinson Hospital, Petah Tikva, Israel.
Hagari-Bechar O; Raphael Recanati Genetics Institute, Rabin Medical Center, Beilinson Hospital, Petah Tikva, Israel.
Bazak L; Raphael Recanati Genetics Institute, Rabin Medical Center, Beilinson Hospital, Petah Tikva, Israel.
Basel-Salmon L; Raphael Recanati Genetics Institute, Rabin Medical Center, Beilinson Hospital, Petah Tikva, Israel.; Sackler Faculty of Medicine, Tel-Aviv University, Tel-Aviv, Israel.; Laboratory of Immunology and Genetics, Felsenstein Medical Research Center, Petah Tikva, Israel.
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Źródło :
Genetics in medicine : official journal of the American College of Medical Genetics [Genet Med] 2021 Jun; Vol. 23 (6), pp. 1095-1100. Date of Electronic Publication: 2021 Jan 20.
Typ publikacji :
Journal Article
MeSH Terms :
Databases, Genetic*
Exome*/genetics
Child ; Databases, Factual ; Female ; Genotype ; Humans ; Phenotype ; Whole Exome Sequencing
Czasopismo naukowe
Tytuł :
Sequence data: expand comprehensive access.
Autorzy :
Roberts RJ
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Źródło :
Nature [Nature] 2021 Mar; Vol. 591 (7849), pp. 202.
Typ publikacji :
Historical Article; Letter
MeSH Terms :
Databases, Genetic*/history
Databases, Genetic*/trends
Information Dissemination*
Sequence Analysis, DNA*
SARS-CoV-2/*genetics
COVID-19/diagnosis ; COVID-19/epidemiology ; COVID-19/virology ; COVID-19 Vaccines ; China ; Databases, Nucleic Acid/history ; History, 20th Century ; History, 21st Century ; Japan ; Polymerase Chain Reaction
Opinia redakcyjna
Tytuł :
Comparative Toxicogenomics Database (CTD): update 2021.
Autorzy :
Davis AP; Department of Biological Sciences, North Carolina State University, Raleigh, NC 27695, USA.
Grondin CJ; Department of Biological Sciences, North Carolina State University, Raleigh, NC 27695, USA.
Johnson RJ; Department of Biological Sciences, North Carolina State University, Raleigh, NC 27695, USA.
Sciaky D; Department of Biological Sciences, North Carolina State University, Raleigh, NC 27695, USA.
Wiegers J; Department of Biological Sciences, North Carolina State University, Raleigh, NC 27695, USA.
Wiegers TC; Department of Biological Sciences, North Carolina State University, Raleigh, NC 27695, USA.
Mattingly CJ; Department of Biological Sciences, North Carolina State University, Raleigh, NC 27695, USA.; Center for Human Health and the Environment, North Carolina State University, Raleigh, NC 27695, USA.
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Źródło :
Nucleic acids research [Nucleic Acids Res] 2021 Jan 08; Vol. 49 (D1), pp. D1138-D1143.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural
MeSH Terms :
Databases, Factual*
Gene-Environment Interaction*
Genome, Human/*drug effects
Genomics/*methods
Prescription Drugs/*pharmacology
Xenobiotics/*toxicity
Databases, Chemical ; Databases, Genetic ; Genotype ; Humans ; Internet ; Knowledge Bases ; Organ Specificity ; Phenotype ; Prescription Drugs/chemistry ; Software ; Toxicogenetics/methods ; Xenobiotics/chemistry
Czasopismo naukowe
Tytuł :
Integration of the Drug-Gene Interaction Database (DGIdb 4.0) with open crowdsource efforts.
Autorzy :
Freshour SL; Department of Medicine, Division of Oncology, Washington University School of Medicine, St Louis, MO 63110, USA.; McDonnell Genome Institute, Washington University School of Medicine, St Louis, MO 63108, USA.
Kiwala S; McDonnell Genome Institute, Washington University School of Medicine, St Louis, MO 63108, USA.
Cotto KC; Department of Medicine, Division of Oncology, Washington University School of Medicine, St Louis, MO 63110, USA.; McDonnell Genome Institute, Washington University School of Medicine, St Louis, MO 63108, USA.
Coffman AC; McDonnell Genome Institute, Washington University School of Medicine, St Louis, MO 63108, USA.
McMichael JF; McDonnell Genome Institute, Washington University School of Medicine, St Louis, MO 63108, USA.
Song JJ; Department of Medicine, Division of Oncology, Washington University School of Medicine, St Louis, MO 63110, USA.; McDonnell Genome Institute, Washington University School of Medicine, St Louis, MO 63108, USA.
Griffith M; Department of Medicine, Division of Oncology, Washington University School of Medicine, St Louis, MO 63110, USA.; McDonnell Genome Institute, Washington University School of Medicine, St Louis, MO 63108, USA.; Department of Genetics, Washington University School of Medicine, St Louis, MO 63110, USA.; Siteman Cancer Center, Washington University School of Medicine, St Louis, MO 63110, USA.
Griffith OL; Department of Medicine, Division of Oncology, Washington University School of Medicine, St Louis, MO 63110, USA.; McDonnell Genome Institute, Washington University School of Medicine, St Louis, MO 63108, USA.; Department of Genetics, Washington University School of Medicine, St Louis, MO 63110, USA.; Siteman Cancer Center, Washington University School of Medicine, St Louis, MO 63110, USA.
Wagner AH; Department of Medicine, Division of Oncology, Washington University School of Medicine, St Louis, MO 63110, USA.; McDonnell Genome Institute, Washington University School of Medicine, St Louis, MO 63108, USA.; The Steve and Cindy Rasmussen Institute for Genomic Medicine, Nationwide Children's Hospital, Columbus, OH 43215, USA.; Department of Pediatrics, The Ohio State University College of Medicine, Columbus, OH 43210, USA.
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Źródło :
Nucleic acids research [Nucleic Acids Res] 2021 Jan 08; Vol. 49 (D1), pp. D1144-D1151.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural
MeSH Terms :
Crowdsourcing*
Databases, Factual*
Databases, Genetic*
Drugs, Investigational/*pharmacology
Genome, Human/*drug effects
Prescription Drugs/*pharmacology
Databases, Chemical ; Drugs, Investigational/chemistry ; Genotype ; Humans ; Internet ; Knowledge Bases ; Phenotype ; Prescription Drugs/chemistry ; Software
Czasopismo naukowe
Tytuł :
Database resources of the National Center for Biotechnology Information.
Autorzy :
Sayers EW; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA.
Beck J; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA.
Bolton EE; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA.
Bourexis D; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA.
Brister JR; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA.
Canese K; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA.
Comeau DC; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA.
Funk K; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA.
Kim S; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA.
Klimke W; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA.
Marchler-Bauer A; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA.
Landrum M; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA.
Lathrop S; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA.
Lu Z; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA.
Madden TL; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA.
O'Leary N; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA.
Phan L; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA.
Rangwala SH; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA.
Schneider VA; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA.
Skripchenko Y; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA.
Wang J; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA.
Ye J; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA.
Trawick BW; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA.
Pruitt KD; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA.
Sherry ST; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA.
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Źródło :
Nucleic acids research [Nucleic Acids Res] 2021 Jan 08; Vol. 49 (D1), pp. D10-D17.
Typ publikacji :
Journal Article; Research Support, N.I.H., Intramural; Review
MeSH Terms :
Databases, Genetic*
National Library of Medicine (U.S.)*
Computational Biology/methods ; Databases, Chemical ; Databases, Nucleic Acid ; Databases, Protein ; Genomics/methods ; Humans ; PubMed ; United States
Czasopismo naukowe
Tytuł :
ZINC20-A Free Ultralarge-Scale Chemical Database for Ligand Discovery.
Autorzy :
Irwin JJ; Byers Hall, Department of Pharmaceutical Chemistry, University of California San Francisco, 1700 4th St, Mailcode 2330, Room BH508A, San Francisco, California 94158-2330, United States.
Tang KG; Byers Hall, Department of Pharmaceutical Chemistry, University of California San Francisco, 1700 4th St, Mailcode 2330, Room BH508A, San Francisco, California 94158-2330, United States.
Young J; Byers Hall, Department of Pharmaceutical Chemistry, University of California San Francisco, 1700 4th St, Mailcode 2330, Room BH508A, San Francisco, California 94158-2330, United States.
Dandarchuluun C; Byers Hall, Department of Pharmaceutical Chemistry, University of California San Francisco, 1700 4th St, Mailcode 2330, Room BH508A, San Francisco, California 94158-2330, United States.
Wong BR; Byers Hall, Department of Pharmaceutical Chemistry, University of California San Francisco, 1700 4th St, Mailcode 2330, Room BH508A, San Francisco, California 94158-2330, United States.
Khurelbaatar M; Byers Hall, Department of Pharmaceutical Chemistry, University of California San Francisco, 1700 4th St, Mailcode 2330, Room BH508A, San Francisco, California 94158-2330, United States.
Moroz YS; Chemspace LLC, 85 Chervonotkatska Street, Suite 1, Kyiv 02094, Ukraine.; Taras Shevchenko National University of Kyiv, Volodymyrska Street 60, Kyiv 01601, Ukraine.
Mayfield J; NextMove Software Ltd, Innovation Centre, 320 Cambridge Science Park, Milton Road, Cambridge CB4 0WG, United Kingdom.
Sayle RA; NextMove Software Ltd, Innovation Centre, 320 Cambridge Science Park, Milton Road, Cambridge CB4 0WG, United Kingdom.
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Źródło :
Journal of chemical information and modeling [J Chem Inf Model] 2020 Dec 28; Vol. 60 (12), pp. 6065-6073. Date of Electronic Publication: 2020 Oct 29.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural
MeSH Terms :
Databases, Chemical*
Databases, Factual ; Ligands
Czasopismo naukowe
Tytuł :
Assessing the risk of bias in choice of search sources for environmental meta-analyses.
Autorzy :
Konno K; School of Natural Sciences, Bangor University, Gwynedd, UK.
Pullin AS; Centre for Evidence-based Conservation, School of Natural Sciences, Bangor University, Gwynedd, UK.
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Źródło :
Research synthesis methods [Res Synth Methods] 2020 Sep; Vol. 11 (5), pp. 698-713. Date of Electronic Publication: 2020 Aug 04.
Typ publikacji :
Journal Article
MeSH Terms :
Databases, Bibliographic*
Meta-Analysis as Topic*
Publication Bias*
Environmental Science/*trends
Computer Simulation ; Databases, Factual ; Environmental Science/methods ; Humans ; Odds Ratio ; Publications ; Research Design ; Risk ; Sample Size ; Search Engine ; Workflow
Czasopismo naukowe
Tytuł :
FastTargetPred: a program enabling the fast prediction of putative protein targets for input chemical databases.
Autorzy :
Chaput L; Univ. Lille, Inserm, Institut Pasteur de Lille, U1177-Drugs and Molecules for Living Systems, Lille F-59000, France.
Guillaume V; Univ. Lille, Inserm, Institut Pasteur de Lille, U1177-Drugs and Molecules for Living Systems, Lille F-59000, France.
Singh N; Univ. Lille, Inserm, Institut Pasteur de Lille, U1177-Drugs and Molecules for Living Systems, Lille F-59000, France.
Deprez B; Univ. Lille, Inserm, Institut Pasteur de Lille, U1177-Drugs and Molecules for Living Systems, Lille F-59000, France.
Villoutreix BO; Univ. Lille, Inserm, Institut Pasteur de Lille, U1177-Drugs and Molecules for Living Systems, Lille F-59000, France.
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Źródło :
Bioinformatics (Oxford, England) [Bioinformatics] 2020 Aug 15; Vol. 36 (14), pp. 4225-4226.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Databases, Chemical*
Software*
Computers ; Databases, Factual ; Ligands
Czasopismo naukowe
Tytuł :
Comparative Assessment of Protein Kinase Inhibitors in Public Databases and in PKIDB.
Autorzy :
Bournez C; Institut de Chimie Organique et Analytique (ICOA), UMR CNRS-Université d'Orléans 7311, Université d'Orléans BP 6759, 45067 Orléans CEDEX 2, France.
Carles F; Institut de Chimie Organique et Analytique (ICOA), UMR CNRS-Université d'Orléans 7311, Université d'Orléans BP 6759, 45067 Orléans CEDEX 2, France.
Peyrat G; Institut de Chimie Organique et Analytique (ICOA), UMR CNRS-Université d'Orléans 7311, Université d'Orléans BP 6759, 45067 Orléans CEDEX 2, France.
Aci-Sèche S; Institut de Chimie Organique et Analytique (ICOA), UMR CNRS-Université d'Orléans 7311, Université d'Orléans BP 6759, 45067 Orléans CEDEX 2, France.
Bourg S; Institut de Chimie Organique et Analytique (ICOA), UMR CNRS-Université d'Orléans 7311, Université d'Orléans BP 6759, 45067 Orléans CEDEX 2, France.
Meyer C; Janssen-Cilag, Centre de Recherche Pharma, CS10615-Chaussée du Vexin, 27106 Val-de-Reuil, France.
Bonnet P; Institut de Chimie Organique et Analytique (ICOA), UMR CNRS-Université d'Orléans 7311, Université d'Orléans BP 6759, 45067 Orléans CEDEX 2, France.
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Źródło :
Molecules (Basel, Switzerland) [Molecules] 2020 Jul 15; Vol. 25 (14). Date of Electronic Publication: 2020 Jul 15.
Typ publikacji :
Journal Article
MeSH Terms :
Databases, Factual*
Protein Kinase Inhibitors/*chemistry
Protein Kinase Inhibitors/*pharmacology
Chemical Phenomena ; Databases, Chemical ; Drug Approval ; Humans ; Molecular Structure ; Structure-Activity Relationship
Czasopismo naukowe
Tytuł :
A pan-genomic approach to genome databases using maize as a model system.
Autorzy :
Woodhouse MR; Corn Insects and Crop Genetics Research Unit, USDA-ARS, Ames, IA, 50011, USA. .
Cannon EK; Corn Insects and Crop Genetics Research Unit, USDA-ARS, Ames, IA, 50011, USA.
Portwood JL 2nd; Corn Insects and Crop Genetics Research Unit, USDA-ARS, Ames, IA, 50011, USA.
Harper LC; Corn Insects and Crop Genetics Research Unit, USDA-ARS, Ames, IA, 50011, USA.
Gardiner JM; Division of Animal Sciences, University of Missouri, 65211, Columbia, MO, USA.
Schaeffer ML; Division of Plant Sciences, University of Missouri, 65211, Columbia, MO, USA.
Andorf CM; Corn Insects and Crop Genetics Research Unit, USDA-ARS, Ames, IA, 50011, USA.; Department of Computer Science, Iowa State University, Ames, IA, 50011, USA.
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Źródło :
BMC plant biology [BMC Plant Biol] 2021 Aug 20; Vol. 21 (1), pp. 385. Date of Electronic Publication: 2021 Aug 20.
Typ publikacji :
Journal Article
MeSH Terms :
Data Accuracy*
Databases as Topic*
Genome, Plant*
Genomics*
Data Collection/*methods
Zea mays/*genetics
Genetic Variation
Czasopismo naukowe
Tytuł :
Convergence of the RMSProp deep learning method with penalty for nonconvex optimization.
Autorzy :
Xu D; School of Mathematics and Statistics, Northeast Normal University, Changchun 130024, China. Electronic address: .
Zhang S; School of Mathematics and Statistics, Northeast Normal University, Changchun 130024, China.
Zhang H; Department of Mathematics, Dalian Maritime University, Dalian 116026, China. Electronic address: .
Mandic DP; Department of Electrical and Electronic Engineering, Imperial College London, SW7 2AZ London, UK. Electronic address: .
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Źródło :
Neural networks : the official journal of the International Neural Network Society [Neural Netw] 2021 Jul; Vol. 139, pp. 17-23. Date of Electronic Publication: 2021 Feb 23.
Typ publikacji :
Journal Article
MeSH Terms :
Algorithms*
Databases, Factual*/standards
Databases, Factual*/statistics & numerical data
Deep Learning*/standards
Humans
Czasopismo naukowe
Tytuł :
Searching practices and inclusion of unpublished studies in systematic reviews of diagnostic accuracy.
Autorzy :
Korevaar DA; Department of Respiratory Medicine, Amsterdam University Medical Centres, University of Amsterdam, The Netherlands.
Salameh JP; Clinical Epidemiology Program, Ottawa Hospital Research Institute, Ottawa, Canada.
Vali Y; Department of Clinical Epidemiology, Biostatistics and Bioinformatics, Amsterdam University Medical Centres, University of Amsterdam, Amsterdam, the Netherlands.
Cohen JF; Department of General Pediatrics and Pediatric Infectious Diseases, Necker-Enfants Malades Hospital, Assistance Publique-Hôpitaux de Paris, Paris, France.; Inserm UMR 1153 (Centre of Research in Epidemiology and Statistics), Paris Descartes University, France.
McInnes MDF; Clinical Epidemiology Program, Ottawa Hospital Research Institute, Ottawa, Canada.; Department of Radiology, University of Ottawa, Ottawa, Canada.
Spijker R; Cochrane Netherlands, Julius Center for Health Sciences and Primary Care, University Medical Centre Utrecht, Utrecht University, The Netherlands.; Medical Library, Amsterdam University Medical Centers, University of Amsterdam, Amsterdam, the Netherlands.
Bossuyt PM; Department of Clinical Epidemiology, Biostatistics and Bioinformatics, Amsterdam University Medical Centres, University of Amsterdam, Amsterdam, the Netherlands.
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Źródło :
Research synthesis methods [Res Synth Methods] 2020 May; Vol. 11 (3), pp. 343-353. Date of Electronic Publication: 2020 Feb 05.
Typ publikacji :
Journal Article
MeSH Terms :
Databases, Bibliographic*
Reproducibility of Results*
Systematic Reviews as Topic*
Databases, Factual ; Diagnosis ; Humans ; PubMed ; Registries
Czasopismo naukowe
Tytuł :
ShinyGO: a graphical gene-set enrichment tool for animals and plants.
Autorzy :
Ge SX; Department of Mathematics and Statistics, Brookings, SD 57007, USA.
Jung D; Department of Mathematics and Statistics, Brookings, SD 57007, USA.; Severance Biomedical Science Institute, Yonsei University College of Medicine, Seoul 03722, South Korea.
Yao R; Department of Mathematics and Statistics, Brookings, SD 57007, USA.
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Źródło :
Bioinformatics (Oxford, England) [Bioinformatics] 2020 Apr 15; Vol. 36 (8), pp. 2628-2629.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Databases, Genetic*
Software*
Animals ; Computational Biology ; Databases, Factual ; Gene Ontology ; Internet ; Probability
Czasopismo naukowe
Tytuł :
Spatiotemporal tracing of pandemic spread from infection data.
Autorzy :
Roy S; Department of Genetics, University of North Carolina, Chapel Hill, USA. .
Biswas P; Arizona State University, Tempe, AZ, USA.
Ghosh P; Department of Computer Science, Virginia Commonwealth University, Virginia, USA.
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Źródło :
Scientific reports [Sci Rep] 2021 Sep 03; Vol. 11 (1), pp. 17689. Date of Electronic Publication: 2021 Sep 03.
Typ publikacji :
Journal Article; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
COVID-19*/epidemiology
COVID-19*/transmission
Contact Tracing*
Databases, Factual*
Pandemics*
Humans ; New York/epidemiology ; Public Health ; SARS-CoV-2
Czasopismo naukowe

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