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Tytuł :
Convergence of the RMSProp deep learning method with penalty for nonconvex optimization.
Autorzy :
Xu D; School of Mathematics and Statistics, Northeast Normal University, Changchun 130024, China. Electronic address: .
Zhang S; School of Mathematics and Statistics, Northeast Normal University, Changchun 130024, China.
Zhang H; Department of Mathematics, Dalian Maritime University, Dalian 116026, China. Electronic address: .
Mandic DP; Department of Electrical and Electronic Engineering, Imperial College London, SW7 2AZ London, UK. Electronic address: .
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Źródło :
Neural networks : the official journal of the International Neural Network Society [Neural Netw] 2021 Jul; Vol. 139, pp. 17-23. Date of Electronic Publication: 2021 Feb 23.
Typ publikacji :
Journal Article
MeSH Terms :
Algorithms*
Databases, Factual*/standards
Databases, Factual*/statistics & numerical data
Deep Learning*/standards
Humans
Czasopismo naukowe
Tytuł :
DrugComb update: a more comprehensive drug sensitivity data repository and analysis portal.
Autorzy :
Zheng S; Research Program in Systems Oncology, Faculty of Medicine, University of Helsinki, Helsinki FI-00290, Finland.
Aldahdooh J; Research Program in Systems Oncology, Faculty of Medicine, University of Helsinki, Helsinki FI-00290, Finland.
Shadbahr T; Research Program in Systems Oncology, Faculty of Medicine, University of Helsinki, Helsinki FI-00290, Finland.
Wang Y; Research Program in Systems Oncology, Faculty of Medicine, University of Helsinki, Helsinki FI-00290, Finland.
Aldahdooh D; Research Program in Systems Oncology, Faculty of Medicine, University of Helsinki, Helsinki FI-00290, Finland.
Bao J; Research Program in Systems Oncology, Faculty of Medicine, University of Helsinki, Helsinki FI-00290, Finland.; Institute for Molecular Medicine Finland, University of Helsinki, Helsinki FI-00290, Finland.
Wang W; Research Program in Systems Oncology, Faculty of Medicine, University of Helsinki, Helsinki FI-00290, Finland.
Tang J; Research Program in Systems Oncology, Faculty of Medicine, University of Helsinki, Helsinki FI-00290, Finland.
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Źródło :
Nucleic acids research [Nucleic Acids Res] 2021 Jul 02; Vol. 49 (W1), pp. W174-W184.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Algorithms*
Databases, Factual*
Drug Evaluation, Preclinical*
Drug Therapy, Combination*
Internet*
COVID-19/drug therapy ; Data Visualization ; Datasets as Topic ; Drug Synergism ; Hemorrhagic Fever, Ebola/drug therapy ; Humans ; Machine Learning ; Malaria/drug therapy ; Neoplasms/drug therapy
Czasopismo naukowe
Tytuł :
iNetModels 2.0: an interactive visualization and database of multi-omics data.
Autorzy :
Arif M; Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm SE-171 21, Sweden.
Zhang C; Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm SE-171 21, Sweden.; School of Pharmaceutical Sciences & Key Laboratory of Advanced Drug Preparation Technologies, Ministry of Education, Zhengzhou University, Zhengzhou, Henan Province, PR 450001, China.
Li X; Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm SE-171 21, Sweden.
Güngör C; Bash Biotech Inc, 600 West Broadway, Suite 700, San Diego, CA, USA.
Çakmak B; Bash Biotech Inc, 600 West Broadway, Suite 700, San Diego, CA, USA.
Arslantürk M; Bash Biotech Inc, 600 West Broadway, Suite 700, San Diego, CA, USA.
Tebani A; Department of Metabolic Biochemistry, Rouen University Hospital, 76000 Rouen, France.; Normandie Univ, UNIROUEN, CHU Rouen, INSERM U1245, 76000 Rouen, France.
Özcan B; Bash Biotech Inc, 600 West Broadway, Suite 700, San Diego, CA, USA.
Subaş O; Bash Biotech Inc, 600 West Broadway, Suite 700, San Diego, CA, USA.
Zhou W; Department of Genetics, Stanford University, Stanford, CA 94305, USA.
Piening B; Providence Cancer Center, Oregon Area, Portland, OR, USA.
Turkez H; Department of Medical Biology, Faculty of Medicine, Atatürk University, Erzurum, Turkey.
Fagerberg L; Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm SE-171 21, Sweden.
Price N; Institute of Systems Biology, Seattle, USA.
Hood L; Institute of Systems Biology, Seattle, USA.
Snyder M; Department of Genetics, Stanford University, Stanford, CA 94305, USA.
Nielsen J; Department of Biology and Biological Engineering, Chalmers University of Technology, Gothenburg, Sweden.
Uhlen M; Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm SE-171 21, Sweden.
Mardinoglu A; Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm SE-171 21, Sweden.; Centre for Host-Microbiome Interactions, Faculty of Dentistry, Oral & Craniofacial Sciences, King's College London, London SE1 9RT, UK.
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Źródło :
Nucleic acids research [Nucleic Acids Res] 2021 Jul 02; Vol. 49 (W1), pp. W271-W276.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Databases, Factual*
Gastrointestinal Microbiome*
Metabolomics*
Metagenomics*
Proteomics*
Mouth/*microbiology
Aged ; Aged, 80 and over ; Gene Regulatory Networks ; Humans ; Middle Aged ; Neoplasms/genetics ; Non-alcoholic Fatty Liver Disease/blood ; Non-alcoholic Fatty Liver Disease/microbiology ; Software
Czasopismo naukowe
Tytuł :
Expasy, the Swiss Bioinformatics Resource Portal, as designed by its users.
Autorzy :
Duvaud S; SIB Swiss Institute of Bioinformatics, Quartier Sorge - Bâtiment Amphipôle, CH-1015 Lausanne, Switzerland.
Gabella C; SIB Swiss Institute of Bioinformatics, Quartier Sorge - Bâtiment Amphipôle, CH-1015 Lausanne, Switzerland.
Lisacek F; Proteome Informatics Group, SIB Swiss Institute of Bioinformatics, and Computer Science Department, University of Geneva, CH-1227 Geneva, Switzerland.; Section of Biology, University of Geneva, CH-1205 Geneva, Switzerland.
Stockinger H; SIB Swiss Institute of Bioinformatics, Quartier Sorge - Bâtiment Amphipôle, CH-1015 Lausanne, Switzerland.
Ioannidis V; SIB Swiss Institute of Bioinformatics, Quartier Sorge - Bâtiment Amphipôle, CH-1015 Lausanne, Switzerland.
Durinx C; SIB Swiss Institute of Bioinformatics, Quartier Sorge - Bâtiment Amphipôle, CH-1015 Lausanne, Switzerland.
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Źródło :
Nucleic acids research [Nucleic Acids Res] 2021 Jul 02; Vol. 49 (W1), pp. W216-W227.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Computational Biology*
Databases, Factual*
Software*
User-Computer Interface
Czasopismo naukowe
Tytuł :
The COVID-19 Data Portal: accelerating SARS-CoV-2 and COVID-19 research through rapid open access data sharing.
Autorzy :
Harrison PW; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Lopez R; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Rahman N; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Allen SG; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Aslam R; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Buso N; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Cummins C; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Fathy Y; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Felix E; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Glont M; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Jayathilaka S; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Kadam S; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Kumar M; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Lauer KB; ELIXIR, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Malhotra G; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Mosaku A; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Edbali O; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Park YM; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Parton A; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Pearce M; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Estrada Pena JF; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Rossetto J; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Russell C; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Selvakumar S; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Sitjà XP; ELIXIR, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Sokolov A; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Thorne R; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Ventouratou M; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Walter P; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Yordanova G; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Zadissa A; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Cochrane G; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Blomberg N; ELIXIR, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Apweiler R; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
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Źródło :
Nucleic acids research [Nucleic Acids Res] 2021 Jul 02; Vol. 49 (W1), pp. W619-W623.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Biomedical Research*
COVID-19*/epidemiology
COVID-19*/genetics
COVID-19*/virology
Databases, Factual*
Datasets as Topic*
Information Dissemination*
Open Access Publishing*
SARS-CoV-2*/chemistry
SARS-CoV-2*/genetics
SARS-CoV-2*/metabolism
SARS-CoV-2*/ultrastructure
Databases, Bibliographic ; Disease Outbreaks ; Humans ; Pandemics ; Time Factors ; Viral Proteins/chemistry ; Viral Proteins/genetics
Czasopismo naukowe
Tytuł :
Clinical Characterization and Prediction of Clinical Severity of SARS-CoV-2 Infection Among US Adults Using Data From the US National COVID Cohort Collaborative.
Autorzy :
Bennett TD; Section of Informatics and Data Science, Department of Pediatrics, University of Colorado School of Medicine, University of Colorado, Aurora.
Moffitt RA; Department of Biomedical Informatics, Stony Brook University, Stony Brook, New York.
Hajagos JG; Stony Brook University, Stony Brook, New York.
Amor B; Palantir Technologies, Denver, Colorado.
Anand A; Stony Brook University, Stony Brook, New York.
Bissell MM; Palantir Technologies, Denver, Colorado.
Bradwell KR; Palantir Technologies, Denver, Colorado.
Bremer C; Stony Brook University, Stony Brook, New York.
Byrd JB; Department of Internal Medicine, The University of Michigan at Ann Arbor, Ann Arbor.
Denham A; Department of Public Health Sciences, University of Rochester Medical Center, Rochester, New York.
DeWitt PE; Section of Informatics and Data Science, Department of Pediatrics, University of Colorado School of Medicine, University of Colorado, Aurora.
Gabriel D; Institute for Clinical and Translational Research, Johns Hopkins University School of Medicine, Baltimore, Maryland.
Garibaldi BT; Department of Medicine, Johns Hopkins University School of Medicine, Baltimore, Maryland.
Girvin AT; Palantir Technologies, Denver, Colorado.
Guinney J; Sage Bionetworks, Seattle, Washington.
Hill EL; Department of Public Health Sciences, University of Rochester Medical Center, Rochester, New York.
Hong SS; Department of Medicine, Johns Hopkins University School of Medicine, Baltimore, Maryland.
Jimenez H; Stony Brook University, Stony Brook, New York.
Kavuluru R; Division of Biomedical Informatics, Department of Internal Medicine, University of Kentucky, Lexington.
Kostka K; Real World Solutions, IQVIA, Cambridge, Massachusetts.; Observational Health Data Sciences and Informatics, New York, New York.
Lehmann HP; Division of Health Science Informatics, Department of Medicine, Johns Hopkins University School of Medicine, Baltimore, Maryland.
Levitt E; Department of Orthopaedic Surgery, University of Alabama at Birmingham, Birmingham.
Mallipattu SK; Stony Brook University, Stony Brook, New York.
Manna A; Palantir Technologies, Denver, Colorado.
McMurry JA; Translational and Integrative Sciences Center, Oregon State University, Corvallis.
Morris M; Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania.
Muschelli J; Department of Biostatistics, Johns Hopkins University School of Medicine, Baltimore, Maryland.
Neumann AJ; Translational and Integrative Sciences Center, Oregon State University, Corvallis.
Palchuk MB; TriNetX, Cambridge, Massachusetts.
Pfaff ER; North Carolina Translational and Clinical Sciences Institute, University of North Carolina at Chapel Hill, Chapel Hill.
Qian Z; Department of biomedical informatics, Stony Brook University, Stony Brook, New York.
Qureshi N; Palantir Technologies, Denver, Colorado.
Russell S; Section of Informatics and Data Science, Department of Pediatrics, University of Colorado School of Medicine, University of Colorado, Aurora.
Spratt H; Department of Preventive Medicine and Public Health, University of Texas Medical Branch, Galveston.
Walden A; Sage Bionetworks, Seattle, Washington.; Oregon Clinical and Translational Research Institute, Oregon Health & Science University, Portland.
Williams AE; Tufts Medical Center Clinical and Translational Science Institute, Tufts Medical Center, Boston, Massachusetts.
Wooldridge JT; Stony Brook University, Stony Brook, New York.
Yoo YJ; Stony Brook University, Stony Brook, New York.
Zhang XT; Department of Medicine, Johns Hopkins University School of Medicine, Baltimore, Maryland.
Zhu RL; Department of Medicine, Johns Hopkins University School of Medicine, Baltimore, Maryland.
Austin CP; National Center for Advancing Translational Sciences, National Institutes of Health, Bethesda, Maryland.
Saltz JH; Department of Biomedical Informatics, Stony Brook University, Stony Brook, New York.
Gersing KR; National Center for Advancing Translational Sciences, National Institutes of Health, Bethesda, Maryland.
Haendel MA; TriNetX, Cambridge, Massachusetts.; Center for Health AI, University of Colorado, Aurora.
Chute CG; Department of Health Policy and Management, Johns Hopkins University School of Medicine, Baltimore, Maryland.; Department of Medicine, Johns Hopkins University School of Medicine, Baltimore, Maryland.; Department of Nursing, Johns Hopkins University School of Medicine, Baltimore, Maryland.
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Corporate Authors :
National COVID Cohort Collaborative (N3C) Consortium
Źródło :
JAMA network open [JAMA Netw Open] 2021 Jul 01; Vol. 4 (7), pp. e2116901. Date of Electronic Publication: 2021 Jul 01.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Validation Study
MeSH Terms :
COVID-19*/ethnology
COVID-19*/mortality
Databases, Factual*
Forecasting*
Hospitalization*
Models, Biological*
Severity of Illness Index*
Adult ; Aged ; Aged, 80 and over ; Comorbidity ; Ethnic Groups ; Extracorporeal Membrane Oxygenation ; Female ; Humans ; Hydrogen-Ion Concentration ; Male ; Middle Aged ; Pandemics ; Respiration, Artificial ; Retrospective Studies ; Risk Factors ; SARS-CoV-2 ; United States ; Young Adult
Czasopismo naukowe
Tytuł :
Subarachnoid Hemorrhage and COVID-19: An Analysis of 282,718 Patients.
Autorzy :
Qureshi AI; Zeenat Qureshi Stroke Institute and Department of Neurology, University of Missouri, Columbia, Missouri, USA.
Baskett WI; Institute for Data Science and Informatics, University of Missouri, Columbia, Missouri, USA.
Huang W; Zeenat Qureshi Stroke Institute and Department of Neurology, University of Missouri, Columbia, Missouri, USA.
Shyu D; Department of Medicine, University of Missouri, Columbia, Missouri, USA.
Myers D; Tiger Institute for Health Innovation, Cerner Corporation, Columbia, Missouri, USA.
Lobanova I; Zeenat Qureshi Stroke Institute and Department of Neurology, University of Missouri, Columbia, Missouri, USA. Electronic address: .
Ishfaq MF; Zeenat Qureshi Stroke Institute and Department of Neurology, University of Missouri, Columbia, Missouri, USA.
Naqvi SH; Department of Medicine, University of Missouri, Columbia, Missouri, USA.
French BR; Zeenat Qureshi Stroke Institute and Department of Neurology, University of Missouri, Columbia, Missouri, USA.
Siddiq F; Division of Neurosurgery, University of Missouri, Columbia, Missouri, USA.
Gomez CR; Zeenat Qureshi Stroke Institute and Department of Neurology, University of Missouri, Columbia, Missouri, USA.
Shyu CR; Institute for Data Science and Informatics, University of Missouri, Columbia, Missouri, USA; Department of Medicine, University of Missouri, Columbia, Missouri, USA; Department of Electrical Engineering and Computer Science, University of Missouri, Columbia, Missouri, USA.
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Źródło :
World neurosurgery [World Neurosurg] 2021 Jul; Vol. 151, pp. e615-e620. Date of Electronic Publication: 2021 Apr 30.
Typ publikacji :
Journal Article; Multicenter Study
MeSH Terms :
Databases, Factual*/trends
COVID-19/*diagnostic imaging
COVID-19/*epidemiology
Subarachnoid Hemorrhage/*diagnostic imaging
Subarachnoid Hemorrhage/*epidemiology
Adult ; Aged ; Female ; Humans ; Male ; Middle Aged ; Mortality/trends
Czasopismo naukowe
Tytuł :
Public mobility data enables COVID-19 forecasting and management at local and global scales.
Autorzy :
Ilin C; School of Information, U.C. Berkeley, Berkeley, USA.
Annan-Phan S; Goldman School of Public Policy, U.C. Berkeley, Berkeley, USA.; Agricultural and Resource Economics, U.C. Berkeley, Berkeley, USA.
Tai XH; School of Information, U.C. Berkeley, Berkeley, USA.
Mehra S; School of Information, U.C. Berkeley, Berkeley, USA.
Hsiang S; Goldman School of Public Policy, U.C. Berkeley, Berkeley, USA. .; National Bureau of Economic Research and Centre for Economic Policy Research, Cambridge, USA. .
Blumenstock JE; School of Information, U.C. Berkeley, Berkeley, USA. .
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Źródło :
Scientific reports [Sci Rep] 2021 Jun 29; Vol. 11 (1), pp. 13531. Date of Electronic Publication: 2021 Jun 29.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Databases, Factual*
Models, Statistical*
COVID-19/*prevention & control
COVID-19/epidemiology ; COVID-19/transmission ; COVID-19/virology ; China/epidemiology ; France/epidemiology ; Humans ; Italy/epidemiology ; Machine Learning ; Quarantine ; Republic of Korea/epidemiology ; SARS-CoV-2/isolation & purification ; Travel ; United States/epidemiology
Czasopismo naukowe
Tytuł :
Development of the Hellenic Food Thesaurus (HelTH), a branded food composition database: Aims, design and preliminary findings.
Autorzy :
Katidi A; Department of Food Science & Human Nutrition, Agricultural University of Athens, Athens, Greece.
Vlassopoulos A; Department of Food Science & Human Nutrition, Agricultural University of Athens, Athens, Greece. Electronic address: .
Kapsokefalou M; Department of Food Science & Human Nutrition, Agricultural University of Athens, Athens, Greece. Electronic address: .
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Źródło :
Food chemistry [Food Chem] 2021 Jun 15; Vol. 347, pp. 129010. Date of Electronic Publication: 2021 Jan 12.
Typ publikacji :
Journal Article
MeSH Terms :
Databases, Factual*
Food Analysis*
Nutritive Value*
Food Labeling/*standards
Nutrients/*analysis
Greece
Czasopismo naukowe
Tytuł :
Dynamics based on analysis of public data for spreading of disease.
Autorzy :
Lima LS; Federal Center for Technological Education of Minas Gerais, Belo Horizonte, MG, 30510-000, Brazil. .
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Źródło :
Scientific reports [Sci Rep] 2021 Jun 09; Vol. 11 (1), pp. 12177. Date of Electronic Publication: 2021 Jun 09.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Databases, Factual*
Models, Statistical*
COVID-19/*epidemiology
COVID-19/*transmission
Humans ; Stochastic Processes ; Uncertainty
Czasopismo naukowe
Tytuł :
A deep-learning pipeline for the diagnosis and discrimination of viral, non-viral and COVID-19 pneumonia from chest X-ray images.
Autorzy :
Wang G; School of Information and Communication Engineering, Beijing University of Posts and Telecommunications, Beijing, China. .
Liu X; Department of Computer Science and Technology & BNRist, Tsinghua University, Beijing, China.
Shen J; Department of Urology, Department of Radiology, Department of Emergency Medicine, Department of Disciplinary Development and Planning, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, Guangzhou, China.
Wang C; Department of Respiratory and Critical Care Medicine, Frontiers Science Center for Disease-related Molecular Network, Center for Translational Medicine and Innovations, West China Hospital, West China Medical School, Sichuan University, Chengdu, China.
Li Z; Center for Biomedicine and Innovations, Faculty of Medicine, Macau University of Science and Technology and University Hospital, Macau, China.
Ye L; Department of Hepatic Surgery and Liver Transplantation Center, The Third Affiliated Hospital of Sun Yat-sen University, Guangzhou, China.
Wu X; Department of Radiology, The First Affiliated Hospital of Anhui Medical University, Hefei, China.
Chen T; Department of Computer Science and Technology & BNRist, Tsinghua University, Beijing, China. .
Wang K; Department of Computer Science and Technology & BNRist, Tsinghua University, Beijing, China.
Zhang X; Department of Computer Science and Technology & BNRist, Tsinghua University, Beijing, China.
Zhou Z; The Sun Yat-sen Cancer Center, Sun Yat-sen University, Guangzhou, China.
Yang J; The First College of Clinical Medical Science, China Three Gorges University, Yichang, China.
Sang Y; The First College of Clinical Medical Science, China Three Gorges University, Yichang, China.
Deng R; Department of Bioinformatics, Bioland Laboratory (Guangzhou Regenerative Medicine and Health Guangdong Laboratory), Guangzhou, China.
Liang W; Department of Thoracic Surgery and Oncology, The First Affiliated Hospital of Guangzhou Medical University, China State Key Laboratory and National Clinical Research Center for Respiratory Disease, Guangzhou, China.
Yu T; Department of Urology, Department of Radiology, Department of Emergency Medicine, Department of Disciplinary Development and Planning, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, Guangzhou, China.
Gao M; Department of Urology, Department of Radiology, Department of Emergency Medicine, Department of Disciplinary Development and Planning, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, Guangzhou, China.
Wang J; Department of Hepatic Surgery and Liver Transplantation Center, The Third Affiliated Hospital of Sun Yat-sen University, Guangzhou, China.
Yang Z; Department of Urology, Department of Radiology, Department of Emergency Medicine, Department of Disciplinary Development and Planning, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, Guangzhou, China.
Cai H; Department of Bioinformatics, Bioland Laboratory (Guangzhou Regenerative Medicine and Health Guangdong Laboratory), Guangzhou, China.
Lu G; Department of Medical Imaging, Jinling Hospital, Medical School of Nanjing University, Nanjing, China.
Zhang L; Department of Medical Imaging, The Third Affiliated Hospital, Southern Medical University, Guangzhou, China.
Yang L; Department of Thoracic Surgery, The First Affiliated Hospital of Sun Yat-sen University, Guangzhou, China.
Xu W; Center for Biomedicine and Innovations, Faculty of Medicine, Macau University of Science and Technology and University Hospital, Macau, China.
Wang W; Center for Biomedicine and Innovations, Faculty of Medicine, Macau University of Science and Technology and University Hospital, Macau, China.
Olvera A; Center for Biomedicine and Innovations, Faculty of Medicine, Macau University of Science and Technology and University Hospital, Macau, China.
Ziyar I; Center for Biomedicine and Innovations, Faculty of Medicine, Macau University of Science and Technology and University Hospital, Macau, China.
Zhang C; Department of Bioinformatics, Bioland Laboratory (Guangzhou Regenerative Medicine and Health Guangdong Laboratory), Guangzhou, China.
Li O; Department of Bioinformatics, Bioland Laboratory (Guangzhou Regenerative Medicine and Health Guangdong Laboratory), Guangzhou, China.
Liao W; Department of Medical Imaging and Deptartment of Cardiology, Xiangya Hospital, Central South University, Changsha, China.
Liu J; Department of Radiology, Second Xiangya Hospital, Central South University, Changsha, China.
Chen W; Department of Radiology, Taihe Hospital, Hubei University of Medicine, Hubei, China.
Chen W; Department of Radiology, The Second Affiliated Hospital and Yuying Children's Hospital of Wenzhou Medical University, Wenzhou, China.
Shi J; Department of Infectious Disease, Wenzhou Central Hospital, Wenzhou, China.
Zheng L; Center for Biomedicine and Innovations, Faculty of Medicine, Macau University of Science and Technology and University Hospital, Macau, China.
Zhang L; Department of Medical Imaging, Jinling Hospital, Medical School of Nanjing University, Nanjing, China.
Yan Z; Department of Radiology, The Second Affiliated Hospital and Yuying Children's Hospital of Wenzhou Medical University, Wenzhou, China.
Zou X; Department of Respiratory and Critical Care Medicine, The First People's Hospital of Kashi Prefecture, Kashi, China.
Lin G; Department of Urology, Department of Radiology, Department of Emergency Medicine, Department of Disciplinary Development and Planning, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, Guangzhou, China.
Cao G; Department of Respiratory and Critical Care Medicine, Frontiers Science Center for Disease-related Molecular Network, Center for Translational Medicine and Innovations, West China Hospital, West China Medical School, Sichuan University, Chengdu, China.
Lau LL; Center for Biomedicine and Innovations, Faculty of Medicine, Macau University of Science and Technology and University Hospital, Macau, China.
Mo L; Department of Medical Imaging and Deptartment of Cardiology, Xiangya Hospital, Central South University, Changsha, China.
Liang Y; Center for Biomedicine and Innovations, Faculty of Medicine, Macau University of Science and Technology and University Hospital, Macau, China.
Roberts M; Oncology R&D, AstraZeneca, Cambridge, UK.; Department of Applied Mathematics and Theoretical Physics, University of Cambridge, Cambridge, UK.
Sala E; Department of Radiology and Cancer Research UK Cambridge Centre, University of Cambridge, Cambridge, UK.
Schönlieb CB; Department of Applied Mathematics and Theoretical Physics, University of Cambridge, Cambridge, UK.
Fok M; Center for Biomedicine and Innovations, Faculty of Medicine, Macau University of Science and Technology and University Hospital, Macau, China.
Lau JY; Department of Applied Biology and Chemical Technology, Hong Kong Polytechnic University, Hong Kong, China.
Xu T; Department of Bioinformatics, Bioland Laboratory (Guangzhou Regenerative Medicine and Health Guangdong Laboratory), Guangzhou, China.
He J; Department of Thoracic Surgery and Oncology, The First Affiliated Hospital of Guangzhou Medical University, China State Key Laboratory and National Clinical Research Center for Respiratory Disease, Guangzhou, China.
Zhang K; Center for Biomedicine and Innovations, Faculty of Medicine, Macau University of Science and Technology and University Hospital, Macau, China. .; Department of Bioinformatics, Bioland Laboratory (Guangzhou Regenerative Medicine and Health Guangdong Laboratory), Guangzhou, China. .
Li W; Department of Respiratory and Critical Care Medicine, Frontiers Science Center for Disease-related Molecular Network, Center for Translational Medicine and Innovations, West China Hospital, West China Medical School, Sichuan University, Chengdu, China. .
Lin T; Department of Urology, Department of Radiology, Department of Emergency Medicine, Department of Disciplinary Development and Planning, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, Guangzhou, China. .
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Źródło :
Nature biomedical engineering [Nat Biomed Eng] 2021 Jun; Vol. 5 (6), pp. 509-521. Date of Electronic Publication: 2021 Apr 15.
Typ publikacji :
Journal Article; Multicenter Study; Research Support, Non-U.S. Gov't
MeSH Terms :
Databases, Factual*
Deep Learning*
SARS-CoV-2*
Tomography, X-Ray Computed*
COVID-19/*diagnostic imaging
Diagnosis, Differential ; Female ; Humans ; Male ; Severity of Illness Index
Czasopismo naukowe
Tytuł :
Commentary: Lies, damn lies, and administrative databases.
Autorzy :
Shah AS; Department of Cardiac Surgery, Vanderbilt University Medical Center, Nashville, Tenn. Electronic address: .
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Źródło :
The Journal of thoracic and cardiovascular surgery [J Thorac Cardiovasc Surg] 2021 Jun; Vol. 161 (6), pp. 2092. Date of Electronic Publication: 2020 Jan 28.
Typ publikacji :
Editorial; Comment
MeSH Terms :
Databases, Factual*
Humans
Opinia redakcyjna
Tytuł :
Critical carE Database for Advanced Research (CEDAR): An automated method to support intensive care units with electronic health record data.
Autorzy :
Schenck EJ; Weill Department of Medicine, Weill Cornell Medicine, New York, NY, United States.
Hoffman KL; Department of Population Health Sciences, Weill Cornell Medicine, New York, NY, United States.
Cusick M; Information Technologies & Services Department, Weill Cornell Medicine, New York, NY, United States.
Kabariti J; Information Technologies & Services Department, Weill Cornell Medicine, New York, NY, United States.
Sholle ET; Information Technologies & Services Department, Weill Cornell Medicine, New York, NY, United States.
Campion TR Jr; Department of Population Health Sciences, Weill Cornell Medicine, New York, NY, United States; Information Technologies & Services Department, Weill Cornell Medicine, New York, NY, United States; Department of Pediatrics, Weill Cornell Medicine, New York, NY, United States; Clinical & Translational Science Center, Weill Cornell Medicine, New York, NY, United States.
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Źródło :
Journal of biomedical informatics [J Biomed Inform] 2021 Jun; Vol. 118, pp. 103789. Date of Electronic Publication: 2021 Apr 14.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
COVID-19*
Databases, Factual*
Electronic Health Records*
Intensive Care Units*
Aged ; Aged, 80 and over ; Critical Care ; Critical Illness ; Female ; Humans ; Male ; Middle Aged ; New York City
Czasopismo naukowe
Tytuł :
Commentary: The Fog of War - The Impact of Missing Data in Database Analyses.
Autorzy :
Vo TX; Division of Cardiac Surgery, University of Ottawa Heart Institute, Ottawa, Ontario, Canada.
Rubens FD; Division of Cardiac Surgery, University of Ottawa Heart Institute, Ottawa, Ontario, Canada. Electronic address: .
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Źródło :
Seminars in thoracic and cardiovascular surgery [Semin Thorac Cardiovasc Surg] 2021 Summer; Vol. 33 (2), pp. 395-396. Date of Electronic Publication: 2020 Nov 09.
Typ publikacji :
Editorial; Comment
MeSH Terms :
Databases, Factual*
Humans
Opinia redakcyjna
Tytuł :
Adverse events involving hallux metatarsophalangeal joint implants: Analysis of the United States Food and Drug Administration data from 2010 to 2018.
Autorzy :
Akoh CC; Duke University Medical Center, Box 2887, Durham, NC 27710, United States. Electronic address: .
Chen J; Duke University Medical Center, Box 2887, Durham, NC 27710, United States.
Kadakia R; Duke University Medical Center, Box 2887, Durham, NC 27710, United States.
Park YU; Department of Orthopedic Surgery, Ajou University Hospital, Ajou University School of Medicine, Suwon, Gyeonggido, Republic of Korea.
Kim H; Department of Orthopedic Surgery, Kangnam Sacred Heart Hospital, Hallym University College of Medicine, Seoul, Republic of Korea.
Adams SB; Duke University Medical Center, Box 2887, Durham, NC 27710, United States.
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Źródło :
Foot and ankle surgery : official journal of the European Society of Foot and Ankle Surgeons [Foot Ankle Surg] 2021 Jun; Vol. 27 (4), pp. 381-388. Date of Electronic Publication: 2020 May 18.
Typ publikacji :
Journal Article
MeSH Terms :
Databases, Factual*
United States Food and Drug Administration*
Arthrodesis/*instrumentation
Arthroplasty, Replacement/*instrumentation
Hallux/*surgery
Hallux Rigidus/*surgery
Joint Prosthesis/*adverse effects
Metatarsophalangeal Joint/*surgery
Osteoarthritis/*surgery
Adult ; Aged ; Female ; Follow-Up Studies ; Humans ; Incidence ; Male ; Middle Aged ; Osteoarthritis/epidemiology ; Prosthesis Failure/etiology ; Prosthesis-Related Infections/etiology ; Treatment Outcome ; United States/epidemiology
Czasopismo naukowe
Tytuł :
FunCoup 5: Functional Association Networks in All Domains of Life, Supporting Directed Links and Tissue-Specificity.
Autorzy :
Persson E; Department of Biochemistry and Biophysics, Stockholm University, Science for Life Laboratory, Box 1031, 17121 Solna, Sweden.
Castresana-Aguirre M; Department of Biochemistry and Biophysics, Stockholm University, Science for Life Laboratory, Box 1031, 17121 Solna, Sweden.
Buzzao D; Department of Biochemistry and Biophysics, Stockholm University, Science for Life Laboratory, Box 1031, 17121 Solna, Sweden.
Guala D; Department of Biochemistry and Biophysics, Stockholm University, Science for Life Laboratory, Box 1031, 17121 Solna, Sweden.
Sonnhammer ELL; Department of Biochemistry and Biophysics, Stockholm University, Science for Life Laboratory, Box 1031, 17121 Solna, Sweden. Electronic address: .
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Źródło :
Journal of molecular biology [J Mol Biol] 2021 May 28; Vol. 433 (11), pp. 166835. Date of Electronic Publication: 2021 Feb 02.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Databases, Factual*
Gene Regulatory Networks*
Organ Specificity*
Protein Interaction Maps*
Bayes Theorem ; COVID-19/metabolism ; COVID-19/virology ; Genome ; Host Microbial Interactions ; Humans ; Protein Binding ; Proteins ; Proteome ; SARS-CoV-2/isolation & purification ; SARS-CoV-2/metabolism ; Transcription Factors
Czasopismo naukowe
Tytuł :
PolarProtDb: A Database of Transmembrane and Secreted Proteins showing Apical-Basal Polarity.
Autorzy :
Zeke A; Membrane Protein Bioinformatics Research Group, Institute of Enzymology, Research Centre for Natural Sciences, Magyar Tudósok körútja 2, H-1117 Budapest, Hungary.
Dobson L; Membrane Protein Bioinformatics Research Group, Institute of Enzymology, Research Centre for Natural Sciences, Magyar Tudósok körútja 2, H-1117 Budapest, Hungary; Structural and Computational Biology Unit, European Molecular Biology Laboratory, Meyerhofstraße 1, 69117 Heidelberg, Germany.
Szekeres LI; Membrane Protein Bioinformatics Research Group, Institute of Enzymology, Research Centre for Natural Sciences, Magyar Tudósok körútja 2, H-1117 Budapest, Hungary.
Langó T; Membrane Protein Bioinformatics Research Group, Institute of Enzymology, Research Centre for Natural Sciences, Magyar Tudósok körútja 2, H-1117 Budapest, Hungary.
Tusnády GE; Membrane Protein Bioinformatics Research Group, Institute of Enzymology, Research Centre for Natural Sciences, Magyar Tudósok körútja 2, H-1117 Budapest, Hungary. Electronic address: .
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Źródło :
Journal of molecular biology [J Mol Biol] 2021 May 28; Vol. 433 (11), pp. 166705. Date of Electronic Publication: 2020 Nov 10.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Databases, Factual*
Epithelial Cells/*cytology
Epithelial Cells/*metabolism
Membrane Proteins/*metabolism
COVID-19/metabolism ; COVID-19/virology ; Cell Movement/physiology ; Cell Polarity/physiology ; Genes ; Glycosylation ; Host Microbial Interactions ; Humans ; Phosphorylation ; Protein Interaction Maps ; Protein Transport ; Proteome ; SARS-CoV-2/metabolism
Czasopismo naukowe
Tytuł :
Identification of the Core Chemical Structure in SureChEMBL Patents.
Autorzy :
Falaguera MJ; Research Group on Systems Pharmacology, Research Program on Biomedical Informatics (GRIB), IMIM Hospital del Mar Medical Research Institute and University Pompeu Fabra, Parc de Recerca Biomèdica (PRBB), Doctor Aiguader 88, 08003 Barcelona, Catalonia, Spain.
Mestres J; Research Group on Systems Pharmacology, Research Program on Biomedical Informatics (GRIB), IMIM Hospital del Mar Medical Research Institute and University Pompeu Fabra, Parc de Recerca Biomèdica (PRBB), Doctor Aiguader 88, 08003 Barcelona, Catalonia, Spain.
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Źródło :
Journal of chemical information and modeling [J Chem Inf Model] 2021 May 24; Vol. 61 (5), pp. 2241-2247. Date of Electronic Publication: 2021 Apr 30.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Databases, Factual*
Czasopismo naukowe
Tytuł :
covid19census: U.S. and Italy COVID-19 metrics and other epidemiological data.
Autorzy :
Zanettini C; Department of Pathology and Laboratory Medicine, Weill Cornell Medicine, 1300 York Avenue, New York, NY 10065, USA.
Omar M; Department of Pathology and Laboratory Medicine, Weill Cornell Medicine, 1300 York Avenue, New York, NY 10065, USA.
Dinalankara W; Department of Pathology and Laboratory Medicine, Weill Cornell Medicine, 1300 York Avenue, New York, NY 10065, USA.
Imada EL; Department of Pathology and Laboratory Medicine, Weill Cornell Medicine, 1300 York Avenue, New York, NY 10065, USA.
Colantuoni E; Department of Biostatistics, Johns Hopkins University, 615 N Wolfe St, Baltimore, MD 21205, USA.
Parmigiani G; Department of Data Sciences, Dana-Farber Cancer Institute, 450 Brookline Avenue, Boston, MA 02215, USA.; Department of Biostatistics, Harvard T.H. Chan School of Public Health, 677 Huntington Ave, Boston, MA 02115, USA.
Marchionni L; Department of Pathology and Laboratory Medicine, Weill Cornell Medicine, 1300 York Avenue, New York, NY 10065, USA.
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Źródło :
Database : the journal of biological databases and curation [Database (Oxford)] 2021 May 15; Vol. 2021.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural
MeSH Terms :
Databases, Factual*
Datasets as Topic*
Pandemics*
SARS-CoV-2*
COVID-19/*epidemiology
Algorithms ; Comorbidity ; Demography ; Diabetes Mellitus/mortality ; Health Surveys ; Humans ; Italy/epidemiology ; Models, Theoretical ; Software ; United States/epidemiology
Czasopismo naukowe
Tytuł :
Administrative data and clinical care.
Autorzy :
Barba R; Área Médica, Hospital Universitario Rey Juan Carlos, Móstoles (Madrid), España. Electronic address: .
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Transliterated Title :
Los datos administrativos y la asistencia clínica.
Źródło :
Medicina clinica [Med Clin (Barc)] 2021 May 07; Vol. 156 (9), pp. 447-448. Date of Electronic Publication: 2021 Feb 24.
Typ publikacji :
Editorial
MeSH Terms :
Databases, Factual*
Humans
Opinia redakcyjna

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