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Tytuł :
The chloroplast genome of Prunus zhengheensis: Genome comparative and phylogenetic relationships analysis.
Autorzy :
Huang X; College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China. Electronic address: .
Tan W; College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China. Electronic address: .
Li F; Jilin Academy of Agricultural Sciences, Jilin 136100, China. Electronic address: .
Liao R; Fujian Academy of Agricultural Sciences, Fuzhou 350013, China. Electronic address: .
Guo Z; Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing 210014, China. Electronic address: .
Shi T; College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China. Electronic address: .
Gao Z; College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China. Electronic address: .
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Źródło :
Gene [Gene] 2021 Aug 15; Vol. 793, pp. 145751. Date of Electronic Publication: 2021 May 29.
Typ publikacji :
Comparative Study; Journal Article
MeSH Terms :
Genes, Plant*
Genome, Chloroplast*
Phylogeny*
Chloroplasts/*genetics
Prunus/*genetics
Base Composition ; China ; Gene Ontology ; Genome Size ; Microsatellite Repeats ; Molecular Sequence Annotation ; Plant Leaves/genetics ; Prunus/classification ; Whole Genome Sequencing
Czasopismo naukowe
Tytuł :
Whole-genome sequencing reveals asymmetric introgression between two sister species of cold-resistant leaf beetles.
Autorzy :
Lukicheva S; Evolutionary Biology and Ecology, Interuniversity Institute of Bioinformatics in Brussels - (IB)², Université libre de Bruxelles, Brussels, Belgium.
Mardulyn P; Evolutionary Biology and Ecology, Interuniversity Institute of Bioinformatics in Brussels - (IB)², Université libre de Bruxelles, Brussels, Belgium.
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Źródło :
Molecular ecology [Mol Ecol] 2021 Aug; Vol. 30 (16), pp. 4077-4089. Date of Electronic Publication: 2021 Jul 02.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Coleoptera*/genetics
Genome, Insect*
Genome, Mitochondrial*/genetics
Animals ; Cold Temperature ; Hybridization, Genetic ; Sequence Analysis, DNA ; Whole Genome Sequencing
Czasopismo naukowe
Tytuł :
Detection of Phenotype-Related Mutations of COVID-19 via the Whole Genomic Data.
Autorzy :
Lv J
Tu S
Xu L
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Źródło :
IEEE/ACM transactions on computational biology and bioinformatics [IEEE/ACM Trans Comput Biol Bioinform] 2021 Jul-Aug; Vol. 18 (4), pp. 1242-1249. Date of Electronic Publication: 2021 Aug 06.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Genome, Viral*
Mutation*
COVID-19/*virology
SARS-CoV-2/*genetics
COVID-19/epidemiology ; Computational Biology ; Databases, Genetic ; Female ; Genome-Wide Association Study ; Humans ; Japan/epidemiology ; Linkage Disequilibrium ; Male ; Middle Aged ; Pandemics ; Phenotype ; Polymorphism, Single Nucleotide ; Whole Genome Sequencing
Czasopismo naukowe
Tytuł :
DArT-based evaluation of soybean germplasm from Polish Gene Bank.
Autorzy :
Czembor E; Plant Breeding and Acclimatization Institute-NRI, Radzikow, Blonie, Poland.
Czembor JH; Plant Breeding and Acclimatization Institute-NRI, Radzikow, Blonie, Poland.
Suchecki R; CSIRO Agriculture and Food, Urrbrae, SA, 5064, Australia.
Watson-Haigh NS; South Australian Genomics Centre, SAHMRI, North Terrace, Adelaide, SA, 5000, Australia. .; Australian Genome Research Facility, Victorian Comprehensive Cancer Centre, Melbourne, VIC, 3000, Australia. .; School of Biological Sciences, University of Adelaide, Adelaide, SA, 5005, Australia. .; Genome Informatics & Bioinformatics Training, Flagstaff Hill, SA, 5159, Australia. .
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Źródło :
BMC research notes [BMC Res Notes] 2021 Aug 30; Vol. 14 (1), pp. 343. Date of Electronic Publication: 2021 Aug 30.
Typ publikacji :
Journal Article
MeSH Terms :
Genome-Wide Association Study*
Soybeans*/genetics
Canada ; Genome, Plant ; Plant Breeding ; Poland ; United States
Czasopismo naukowe
Tytuł :
An improved draft genome assembly of Meloidogyne graminicola IARI strain using long-read sequencing.
Autorzy :
Somvanshi VS; Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, Delhi 110012, India.
Dash M; Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, Delhi 110012, India.
Bhat CG; Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, Delhi 110012, India.
Budhwar R; Bionivid Technology Private Limited, 209, 4th Cross Rd, B Channasandra, Kasturi Nagar, Bengaluru, Karnataka 560043, India.
Godwin J; Bionivid Technology Private Limited, 209, 4th Cross Rd, B Channasandra, Kasturi Nagar, Bengaluru, Karnataka 560043, India.
Shukla RN; Bionivid Technology Private Limited, 209, 4th Cross Rd, B Channasandra, Kasturi Nagar, Bengaluru, Karnataka 560043, India.
Patrignani A; Functional Genomics Center Zurich, Winterthurerstr. 190, Y32H52, 8057 Zurich, Switzerland.
Schlapbach R; Functional Genomics Center Zurich, Winterthurerstr. 190, Y32H52, 8057 Zurich, Switzerland.
Rao U; Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, Delhi 110012, India. Electronic address: .
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Źródło :
Gene [Gene] 2021 Aug 15; Vol. 793, pp. 145748. Date of Electronic Publication: 2021 May 30.
Typ publikacji :
Journal Article
MeSH Terms :
Genes, Helminth*
Genome, Helminth*
Helminth Proteins/*genetics
Oryza/*parasitology
Tylenchoidea/*genetics
Animals ; Gene Ontology ; Genome Size ; Helminth Proteins/classification ; High-Throughput Nucleotide Sequencing/methods ; Microsatellite Repeats ; Molecular Sequence Annotation ; Open Reading Frames ; Phylogeny ; Plant Diseases/parasitology ; Tylenchoidea/classification
Czasopismo naukowe
Tytuł :
Complete genome sequence and probiotic properties of Lactococcus petauri LZys1 isolated from healthy human gut.
Autorzy :
Li O; Department of Pathogenic Biology, School of Basic Medicine, Public Center of Experimental Technology of Pathogen Biology technology platform, Southwest Medical University, Luzhou, Sichuan 646000, PR China.; Faculty of Clinical Medicine, Southwest Medical University, Luzhou, Sichuan 646000, PR China.
Zhang H; Department of Pathogenic Biology, School of Basic Medicine, Public Center of Experimental Technology of Pathogen Biology technology platform, Southwest Medical University, Luzhou, Sichuan 646000, PR China.; Faculty of Clinical Medicine, Southwest Medical University, Luzhou, Sichuan 646000, PR China.
Wang W; Department of Pathogenic Biology, School of Basic Medicine, Public Center of Experimental Technology of Pathogen Biology technology platform, Southwest Medical University, Luzhou, Sichuan 646000, PR China.; Faculty of Clinical Medicine, Southwest Medical University, Luzhou, Sichuan 646000, PR China.
Liang Y; Department of Pathogenic Biology, School of Basic Medicine, Public Center of Experimental Technology of Pathogen Biology technology platform, Southwest Medical University, Luzhou, Sichuan 646000, PR China.; Faculty of Clinical Medicine, Southwest Medical University, Luzhou, Sichuan 646000, PR China.
Chen W; Department of Pathogenic Biology, School of Basic Medicine, Public Center of Experimental Technology of Pathogen Biology technology platform, Southwest Medical University, Luzhou, Sichuan 646000, PR China.; Faculty of Clinical Medicine, Southwest Medical University, Luzhou, Sichuan 646000, PR China.
Din AU; Drug Discovery Research Center, Southwest Medical University, Luzhou, PR China.
Li L; Department of Pathogenic Biology, School of Basic Medicine, Public Center of Experimental Technology of Pathogen Biology technology platform, Southwest Medical University, Luzhou, Sichuan 646000, PR China.
Zhou Y; Department of Pathogenic Biology, School of Basic Medicine, Public Center of Experimental Technology of Pathogen Biology technology platform, Southwest Medical University, Luzhou, Sichuan 646000, PR China.
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Źródło :
Journal of medical microbiology [J Med Microbiol] 2021 Aug; Vol. 70 (8).
Typ publikacji :
Journal Article
MeSH Terms :
Genome, Bacterial*
Lactococcus*/cytology
Lactococcus*/genetics
Lactococcus*/isolation & purification
Lactococcus*/physiology
Probiotics*
Gastrointestinal Tract/*microbiology
Animals ; Bacteria/growth & development ; Bacteria/pathogenicity ; Base Sequence ; Feces/microbiology ; Genes, Bacterial ; Humans ; Male ; Molecular Sequence Annotation ; Moths/microbiology ; Phylogeny ; Polysaccharides, Bacterial/biosynthesis ; Polysaccharides, Bacterial/genetics ; Whole Genome Sequencing ; Young Adult
SCR Organism :
Lactococcus petauri
Czasopismo naukowe
Tytuł :
A large-scale genome-wide association analysis reveals QTL and candidate genes for intramuscular fat content in Duroc pigs.
Autorzy :
Zhuang Z; College of Animal Science and National Engineering Research Center for Breeding Swine Industry, South China Agricultural University, Guangzhou, 510642, China.; Guangdong Provincial Laboratory of Lingnan Modern Agricultural Science and Technology, Guangzhou, 510642, China.
Ding R; College of Animal Science and National Engineering Research Center for Breeding Swine Industry, South China Agricultural University, Guangzhou, 510642, China.; Guangdong Provincial Laboratory of Lingnan Modern Agricultural Science and Technology, Guangzhou, 510642, China.
Qiu Y; College of Animal Science and National Engineering Research Center for Breeding Swine Industry, South China Agricultural University, Guangzhou, 510642, China.; Guangdong Provincial Laboratory of Lingnan Modern Agricultural Science and Technology, Guangzhou, 510642, China.
Wu J; College of Animal Science and National Engineering Research Center for Breeding Swine Industry, South China Agricultural University, Guangzhou, 510642, China.; Guangdong Provincial Laboratory of Lingnan Modern Agricultural Science and Technology, Guangzhou, 510642, China.
Zhou S; College of Animal Science and National Engineering Research Center for Breeding Swine Industry, South China Agricultural University, Guangzhou, 510642, China.; Guangdong Provincial Laboratory of Lingnan Modern Agricultural Science and Technology, Guangzhou, 510642, China.
Quan J; College of Animal Science and National Engineering Research Center for Breeding Swine Industry, South China Agricultural University, Guangzhou, 510642, China.; Guangdong Provincial Laboratory of Lingnan Modern Agricultural Science and Technology, Guangzhou, 510642, China.
Zheng E; College of Animal Science and National Engineering Research Center for Breeding Swine Industry, South China Agricultural University, Guangzhou, 510642, China.; Guangdong Provincial Laboratory of Lingnan Modern Agricultural Science and Technology, Guangzhou, 510642, China.; Guangdong Provincial Key Laboratory of Agro-animal Genomics and Molecular Breeding, Guangzhou, 510642, China.
Li Z; College of Animal Science and National Engineering Research Center for Breeding Swine Industry, South China Agricultural University, Guangzhou, 510642, China.; Guangdong Provincial Laboratory of Lingnan Modern Agricultural Science and Technology, Guangzhou, 510642, China.; State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, Guangzhou, 510642, China.; Guangdong Provincial Key Laboratory of Agro-animal Genomics and Molecular Breeding, Guangzhou, 510642, China.
Wu Z; College of Animal Science and National Engineering Research Center for Breeding Swine Industry, South China Agricultural University, Guangzhou, 510642, China.; Guangdong Provincial Laboratory of Lingnan Modern Agricultural Science and Technology, Guangzhou, 510642, China.; Guangdong Provincial Key Laboratory of Agro-animal Genomics and Molecular Breeding, Guangzhou, 510642, China.
Yang J; College of Animal Science and National Engineering Research Center for Breeding Swine Industry, South China Agricultural University, Guangzhou, 510642, China.; Guangdong Provincial Laboratory of Lingnan Modern Agricultural Science and Technology, Guangzhou, 510642, China.; State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, Guangzhou, 510642, China.; Guangdong Provincial Key Laboratory of Agro-animal Genomics and Molecular Breeding, Guangzhou, 510642, China.
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Źródło :
Animal genetics [Anim Genet] 2021 Aug; Vol. 52 (4), pp. 518-522. Date of Electronic Publication: 2021 May 31.
Typ publikacji :
Journal Article
MeSH Terms :
Adipose Tissue*
Genome-Wide Association Study*
Muscles/*physiology
Sus scrofa/*genetics
Animals ; Female ; Genome ; Male ; Quantitative Trait Loci
Czasopismo naukowe
Tytuł :
Identification and characterisation of mitochondrial sequences integrated into the ovine nuclear genome.
Autorzy :
Féménia M; INRAE, AgroParisTech, GABI, Université Paris-Saclay, Jouy-en-Josas, F-78350, France.
Charles M; INRAE, AgroParisTech, GABI, Université Paris-Saclay, Jouy-en-Josas, F-78350, France.; SIGENAE, INRAE, Jouy-en-Josas, F-78350, France.
Boulling A; INRAE, AgroParisTech, GABI, Université Paris-Saclay, Jouy-en-Josas, F-78350, France.
Rocha D; INRAE, AgroParisTech, GABI, Université Paris-Saclay, Jouy-en-Josas, F-78350, France.
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Źródło :
Animal genetics [Anim Genet] 2021 Aug; Vol. 52 (4), pp. 556-559. Date of Electronic Publication: 2021 May 31.
Typ publikacji :
Journal Article
MeSH Terms :
Genome*
Cell Nucleus/*genetics
DNA, Mitochondrial/*genetics
Sheep, Domestic/*genetics
Animals ; Female ; Genome, Mitochondrial ; Sequence Analysis, DNA/veterinary
Czasopismo naukowe
Tytuł :
Investigating the genetic architecture of disease resilience in pigs by genome-wide association studies of complete blood count traits collected from a natural disease challenge model.
Autorzy :
Bai X; Livestock Gentec, Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada.
Yang T; Livestock Gentec, Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada.; Current: ST Genetics, Navasota, TX, USA.
Putz AM; Department of Animal Science, Iowa State University, Ames, IA, USA.
Wang Z; Livestock Gentec, Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada.
Li C; Livestock Gentec, Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada.; Lacombe Research and Development Centre, Agriculture and Agri-Food Canada, Lacombe, AB, Canada.
Fortin F; Centre de Développement du Porc du Québec, Inc., Quebec City, QC, Canada.
Harding JCS; Department of Large Animal Clinical Sciences, University of Saskatchewan, Saskatoon, SK, Canada.
Dyck MK; Livestock Gentec, Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada.
Dekkers JCM; Current: ST Genetics, Navasota, TX, USA.
Field CJ; Livestock Gentec, Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada.
Plastow GS; Livestock Gentec, Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada. .
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Corporate Authors :
PigGen Canada
Źródło :
BMC genomics [BMC Genomics] 2021 Jul 13; Vol. 22 (1), pp. 535. Date of Electronic Publication: 2021 Jul 13.
Typ publikacji :
Journal Article
MeSH Terms :
Genome-Wide Association Study*
Polymorphism, Single Nucleotide*
Animals ; Blood Cell Count ; Genome ; Phenotype ; Sus scrofa/genetics ; Swine/genetics
Czasopismo naukowe
Tytuł :
Characterization and Phylogenetic Analysis of the Mitochondrial Genome Sequence of Nisia fuliginosa (Hemiptera: Fulgoroidea: Meenoplidae).
Autorzy :
Lv SS
Zhang YJ; Institute of Entomology and Special Key Laboratory for Development and Utilization of Insect Resources of Guizhou, Guizhou University, Guiyang 550025, China.
Gong N; Institute of Entomology and Special Key Laboratory for Development and Utilization of Insect Resources of Guizhou, Guizhou University, Guiyang 550025, China.
Chen XS; Institute of Entomology and Special Key Laboratory for Development and Utilization of Insect Resources of Guizhou, Guizhou University, Guiyang 550025, China.
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Źródło :
Journal of insect science (Online) [J Insect Sci] 2021 Jul 01; Vol. 21 (4).
Typ publikacji :
Journal Article
MeSH Terms :
Genome, Mitochondrial*
Phylogeny*
Hemiptera/*genetics
Animals ; Classification ; Gene Order ; Genome, Insect ; RNA, Ribosomal/genetics
Czasopismo naukowe
Tytuł :
Identification of novel genomic regions associated with nine mineral elements in Chinese winter wheat grain.
Autorzy :
Wang W; State Key Laboratory of Crop Biology, Key Laboratory of Crop Biology of Shandong Province, Group of Wheat Quality and Molecular Breeding, College of Agronomy, Shandong Agricultural University, Tai'an, Shandong, 271000, P.R. China.
Guo H; State Key Laboratory of Crop Biology, Key Laboratory of Crop Biology of Shandong Province, Group of Wheat Quality and Molecular Breeding, College of Agronomy, Shandong Agricultural University, Tai'an, Shandong, 271000, P.R. China.
Wu C; State Key Laboratory of Crop Biology, Key Laboratory of Crop Biology of Shandong Province, Group of Wheat Quality and Molecular Breeding, College of Agronomy, Shandong Agricultural University, Tai'an, Shandong, 271000, P.R. China.
Yu H; State Key Laboratory of Crop Biology, Key Laboratory of Crop Biology of Shandong Province, Group of Wheat Quality and Molecular Breeding, College of Agronomy, Shandong Agricultural University, Tai'an, Shandong, 271000, P.R. China.
Li X; Handan Academy of Agricultural Sciences, Handan, Hebei, 056000, P.R. China.
Chen G; College of Ecology and Garden Architecture, Dezhou University, Dezhou, Shandong, 253023, P.R. China.
Tian J; State Key Laboratory of Crop Biology, Key Laboratory of Crop Biology of Shandong Province, Group of Wheat Quality and Molecular Breeding, College of Agronomy, Shandong Agricultural University, Tai'an, Shandong, 271000, P.R. China.
Deng Z; State Key Laboratory of Crop Biology, Key Laboratory of Crop Biology of Shandong Province, Group of Wheat Quality and Molecular Breeding, College of Agronomy, Shandong Agricultural University, Tai'an, Shandong, 271000, P.R. China. .
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Źródło :
BMC plant biology [BMC Plant Biol] 2021 Jul 01; Vol. 21 (1), pp. 311. Date of Electronic Publication: 2021 Jul 01.
Typ publikacji :
Journal Article
MeSH Terms :
Genome, Plant*
Seasons*
Minerals/*metabolism
Seeds/*genetics
Triticum/*genetics
Alleles ; Chromosome Mapping ; Genetic Loci ; Genetic Markers ; Genome-Wide Association Study ; Phenotype
Czasopismo naukowe
Tytuł :
Genomic analysis of Medicago ruthenica provides insights into its tolerance to abiotic stress and demographic history.
Autorzy :
Yin M; State Key Laboratory of Grassland Agro-Ecosystems, Institute of Innovation Ecology & School of Life Sciences, Lanzhou University, Lanzhou, China.
Zhang S; State Key Laboratory of Grassland Agro-Ecosystems, Institute of Innovation Ecology & School of Life Sciences, Lanzhou University, Lanzhou, China.
Du X; State Key Laboratory of Grassland Agro-Ecosystems, Institute of Innovation Ecology & School of Life Sciences, Lanzhou University, Lanzhou, China.
Mateo RG; Departamento de Biología (Botánica), Universidad Autónoma de Madrid, Madrid, Spain.; Centro de Investigación en Biodiversidad y Cambio Global (CIBC-UAM), Universidad Autónoma de Madrid, Madrid, Spain.
Guo W; State Key Laboratory of Grassland Agro-Ecosystems, Institute of Innovation Ecology & School of Life Sciences, Lanzhou University, Lanzhou, China.
Li A; State Key Laboratory of Grassland Agro-Ecosystems, Institute of Innovation Ecology & School of Life Sciences, Lanzhou University, Lanzhou, China.
Wang Z; State Key Laboratory of Grassland Agro-Ecosystems, Institute of Innovation Ecology & School of Life Sciences, Lanzhou University, Lanzhou, China.
Wu S; State Key Laboratory of Grassland Agro-Ecosystems, Institute of Innovation Ecology & School of Life Sciences, Lanzhou University, Lanzhou, China.
Chen J; State Key Laboratory of Grassland Agro-Ecosystems, Institute of Innovation Ecology & School of Life Sciences, Lanzhou University, Lanzhou, China.
Liu J; State Key Laboratory of Grassland Agro-Ecosystems, Institute of Innovation Ecology & School of Life Sciences, Lanzhou University, Lanzhou, China.; Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education & State Key Laboratory of Hydraulics & Mountain River Engineering, College of Life Sciences, Sichuan University, Chengdu, China.
Ren G; State Key Laboratory of Grassland Agro-Ecosystems, Institute of Innovation Ecology & School of Life Sciences, Lanzhou University, Lanzhou, China.
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Źródło :
Molecular ecology resources [Mol Ecol Resour] 2021 Jul; Vol. 21 (5), pp. 1641-1657. Date of Electronic Publication: 2021 Mar 09.
Typ publikacji :
Journal Article
MeSH Terms :
Gene Expression Regulation, Plant*
Genome, Plant*
Stress, Physiological*
Medicago/*genetics
Gene Duplication ; Genome Size ; Genomics
Czasopismo naukowe
Tytuł :
Balrog: A universal protein model for prokaryotic gene prediction.
Autorzy :
Sommer MJ; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, Maryland, United States of America.; Center for Computational Biology, Johns Hopkins University, Baltimore, Maryland, United States of America.
Salzberg SL; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, Maryland, United States of America.; Center for Computational Biology, Johns Hopkins University, Baltimore, Maryland, United States of America.; Departments of Computer Science and Biostatistics, Johns Hopkins University, Baltimore, Maryland, United States of America.
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Źródło :
PLoS computational biology [PLoS Comput Biol] 2021 Feb 26; Vol. 17 (2), pp. e1008727. Date of Electronic Publication: 2021 Feb 26 (Print Publication: 2021).
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural
MeSH Terms :
Gene Expression Profiling*
Genome, Bacterial*
Prokaryotic Cells*
Genome, Microbial/*genetics
Genomics/*methods
Algorithms ; Computational Biology ; Computer Simulation ; Genome ; Genome, Archaeal ; Molecular Sequence Annotation ; Open Reading Frames ; Programming Languages ; Protein Biosynthesis ; Software
Czasopismo naukowe
Tytuł :
Phylogenetic position of Bupleurum sikangense inferred from the complete chloroplast genome sequence.
Autorzy :
Xie X; School of Traditional Chinese Medicine, Southern Medical University, Guangzhou 510515, China.
Huang R; School of Traditional Chinese Medicine, Southern Medical University, Guangzhou 510515, China.
Li F; School of Traditional Chinese Medicine, Southern Medical University, Guangzhou 510515, China.
Tian E; School of Traditional Chinese Medicine, Southern Medical University, Guangzhou 510515, China.
Li C; School of Traditional Chinese Medicine, Southern Medical University, Guangzhou 510515, China.
Chao Z; Department of Pharmacy, Zhujiang Hospital, Southern Medical University, Guangzhou 510282, China; School of Traditional Chinese Medicine, Southern Medical University, Guangzhou 510515, China; Guangdong Provincial Key Laboratory of Chinese Medicine Pharmaceutics, Guangzhou 510515, China. Electronic address: .
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Źródło :
Gene [Gene] 2021 Sep 25; Vol. 798, pp. 145801. Date of Electronic Publication: 2021 Jun 25.
Typ publikacji :
Journal Article
MeSH Terms :
Genome, Chloroplast*
Bupleurum/*classification
Bupleurum/*genetics
Genome, Plant ; Phylogeny ; RNA Editing ; RNA, Plant ; Sequence Analysis, DNA
Czasopismo naukowe
Tytuł :
Genome-wide sequencing-based identification of methylation quantitative trait loci and their role in schizophrenia risk.
Autorzy :
Perzel Mandell KA; Lieber Institute for Brain Development, Johns Hopkins Medical Campus, Baltimore, MD, USA.; Department of Genetic Medicine, Johns Hopkins University School of Medicine (JHSOM), Baltimore, MD, USA.
Eagles NJ; Lieber Institute for Brain Development, Johns Hopkins Medical Campus, Baltimore, MD, USA.
Wilton R; Department of Physics and Astronomy, Johns Hopkins University, Baltimore, MD, USA.
Price AJ; Lieber Institute for Brain Development, Johns Hopkins Medical Campus, Baltimore, MD, USA.; Department of Genetic Medicine, Johns Hopkins University School of Medicine (JHSOM), Baltimore, MD, USA.
Semick SA; Lieber Institute for Brain Development, Johns Hopkins Medical Campus, Baltimore, MD, USA.
Collado-Torres L; Lieber Institute for Brain Development, Johns Hopkins Medical Campus, Baltimore, MD, USA.
Ulrich WS; Lieber Institute for Brain Development, Johns Hopkins Medical Campus, Baltimore, MD, USA.
Tao R; Lieber Institute for Brain Development, Johns Hopkins Medical Campus, Baltimore, MD, USA.
Han S; Lieber Institute for Brain Development, Johns Hopkins Medical Campus, Baltimore, MD, USA.; Department of Psychiatry and Behavioral Sciences, JHSOM, Baltimore, MD, USA.
Szalay AS; Department of Physics and Astronomy, Johns Hopkins University, Baltimore, MD, USA.; Department of Computer Science, JHSOM, Baltimore, MD, USA.
Hyde TM; Lieber Institute for Brain Development, Johns Hopkins Medical Campus, Baltimore, MD, USA.; Department of Psychiatry and Behavioral Sciences, JHSOM, Baltimore, MD, USA.; Department of Neurology, JHSOM, Baltimore, MD, USA.
Kleinman JE; Lieber Institute for Brain Development, Johns Hopkins Medical Campus, Baltimore, MD, USA.; Department of Psychiatry and Behavioral Sciences, JHSOM, Baltimore, MD, USA.
Weinberger DR; Lieber Institute for Brain Development, Johns Hopkins Medical Campus, Baltimore, MD, USA. .; Department of Genetic Medicine, Johns Hopkins University School of Medicine (JHSOM), Baltimore, MD, USA. .; Department of Psychiatry and Behavioral Sciences, JHSOM, Baltimore, MD, USA. .; Department of Neurology, JHSOM, Baltimore, MD, USA. .; Department of Neuroscience, JHSOM, Baltimore, MD, USA. .
Jaffe AE; Lieber Institute for Brain Development, Johns Hopkins Medical Campus, Baltimore, MD, USA. .; Department of Genetic Medicine, Johns Hopkins University School of Medicine (JHSOM), Baltimore, MD, USA. .; Department of Psychiatry and Behavioral Sciences, JHSOM, Baltimore, MD, USA. .; Department of Neuroscience, JHSOM, Baltimore, MD, USA. .; Department of Mental Health, Johns Hopkins Bloomberg School of Public Health (JHBSPH), Baltimore, MD, USA. .; Department of Biostatistics, JHBSPH, Baltimore, MD, USA. .
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Źródło :
Nature communications [Nat Commun] 2021 Sep 02; Vol. 12 (1), pp. 5251. Date of Electronic Publication: 2021 Sep 02.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
DNA Methylation*
Genome, Human*
Quantitative Trait Loci/*genetics
Schizophrenia/*genetics
Age Factors ; Brain/metabolism ; Brain/pathology ; CpG Islands/genetics ; Epigenesis, Genetic ; Genetic Predisposition to Disease/genetics ; Genetic Variation ; Genome-Wide Association Study ; Genotype ; Humans ; Polymorphism, Single Nucleotide
Czasopismo naukowe
Tytuł :
Characterization and genome sequence of the genetically unique Escherichia bacteriophage vB_EcoM_IME392.
Autorzy :
Hu Y; College of Life Science and Technology, Beijing University of Chemical Technology, Beijing, 100029, China.
Tong S; Bioinformatics Graduate Program, University of British Columbia, Vancouver, BC, Canada.
Li P; College of Veterinary Medicine, Yangzhou University, Yangzhou, 225009, China.
An X; College of Life Science and Technology, Beijing University of Chemical Technology, Beijing, 100029, China.
Song L; College of Life Science and Technology, Beijing University of Chemical Technology, Beijing, 100029, China. .; Beijing Advanced Innovation Center for Soft Matter Science and Engineering, Beijing University of Chemical Technology, Beijing, 100029, China. .
Fan H; College of Life Science and Technology, Beijing University of Chemical Technology, Beijing, 100029, China. .; Beijing Advanced Innovation Center for Soft Matter Science and Engineering, Beijing University of Chemical Technology, Beijing, 100029, China. .
Tong Y; College of Life Science and Technology, Beijing University of Chemical Technology, Beijing, 100029, China. .; Beijing Advanced Innovation Center for Soft Matter Science and Engineering, Beijing University of Chemical Technology, Beijing, 100029, China. .
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Źródło :
Archives of virology [Arch Virol] 2021 Sep; Vol. 166 (9), pp. 2505-2520. Date of Electronic Publication: 2021 Jul 08.
Typ publikacji :
Journal Article
MeSH Terms :
Whole Genome Sequencing*
Coliphages/*genetics
Escherichia coli/*virology
Myoviridae/*genetics
Base Composition ; Base Sequence ; China ; Chromosome Mapping ; Coliphages/classification ; DNA, Viral/genetics ; Genome, Viral ; High-Throughput Nucleotide Sequencing ; Host Specificity ; Hydrogen-Ion Concentration ; Myoviridae/classification ; Phylogeny ; Proteomics ; Sewage/virology ; Temperature
Czasopismo naukowe
Tytuł :
Complete genome sequence of a new isolate of caper latent virus in caper.
Autorzy :
Tiberini A; CREA Centro di Ricerca Difesa e Certificazione, Via C.G. Bertero 22, 00156, Roma, Italy. .; Dipartimento di AGRARIA, Università degli Studi Mediterranea di Reggio Calabria, Località Feo di Vito, 89122, Reggio Calabria, Italy. .
Fontana I; Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (IBBR), U.O.S. di Palermo Corso Calatafimi 414, 90129, Palermo, Italy.
Mercati F; Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (IBBR), U.O.S. di Palermo Corso Calatafimi 414, 90129, Palermo, Italy.
Adams I; Fera Science Ltd, Sand Hutton, York, YO41 1LZ, UK.
Fox A; Fera Science Ltd, Sand Hutton, York, YO41 1LZ, UK.
Tomassoli L; CREA Centro di Ricerca Difesa e Certificazione, Via C.G. Bertero 22, 00156, Roma, Italy.
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Źródło :
Archives of virology [Arch Virol] 2021 Sep; Vol. 166 (9), pp. 2619-2621. Date of Electronic Publication: 2021 Jul 02.
Typ publikacji :
Journal Article
MeSH Terms :
Whole Genome Sequencing*
Capparis/*virology
Carlavirus/*classification
Carlavirus/*genetics
Carlavirus/*isolation & purification
Plant Diseases/*virology
Genome, Viral ; High-Throughput Nucleotide Sequencing ; Open Reading Frames ; Phylogeny ; RNA, Viral/genetics ; Sicily
Czasopismo naukowe
Tytuł :
Complete genome sequence of a novel fish papillomavirus detected in farmed wels catfish (Silurus glanis).
Autorzy :
Surján A; Institute for Veterinary Medical Research, Centre for Agricultural Research, ELKH, 1143 Budapest, Hungária krt. 21., P.O. Box 18, 1581, Budapest, Hungary.
Fónagy E; Institute for Veterinary Medical Research, Centre for Agricultural Research, ELKH, 1143 Budapest, Hungária krt. 21., P.O. Box 18, 1581, Budapest, Hungary.
Eszterbauer E; Institute for Veterinary Medical Research, Centre for Agricultural Research, ELKH, 1143 Budapest, Hungária krt. 21., P.O. Box 18, 1581, Budapest, Hungary.
Harrach B; Institute for Veterinary Medical Research, Centre for Agricultural Research, ELKH, 1143 Budapest, Hungária krt. 21., P.O. Box 18, 1581, Budapest, Hungary.
Doszpoly A; Institute for Veterinary Medical Research, Centre for Agricultural Research, ELKH, 1143 Budapest, Hungária krt. 21., P.O. Box 18, 1581, Budapest, Hungary. .
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Źródło :
Archives of virology [Arch Virol] 2021 Sep; Vol. 166 (9), pp. 2603-2606. Date of Electronic Publication: 2021 Jun 11.
Typ publikacji :
Journal Article
MeSH Terms :
Whole Genome Sequencing*
Catfishes/*virology
Fish Diseases/*virology
Papillomaviridae/*classification
Papillomaviridae/*genetics
Papillomaviridae/*isolation & purification
Papillomavirus Infections/*veterinary
Papillomavirus Infections/*virology
Animals ; Genome, Viral ; High-Throughput Nucleotide Sequencing ; Hungary ; Open Reading Frames ; Phylogeny ; Skin/virology
Czasopismo naukowe
Tytuł :
Population genome of the newly discovered Jinchuan yak to understand its adaptive evolution in extreme environments and generation mechanism of the multirib trait.
Autorzy :
Lan D; Ministry of Education of Key Laboratory of Qinghai-Tibet Plateau Animal Genetic Resource and Utilization, Southwest Minzu University, Chengdu, China.; Institute of Qinghai-Tibetan Plateau, Southwest Minzu University, Chengdu, China.
Ji W; Ministry of Education of Key Laboratory of Qinghai-Tibet Plateau Animal Genetic Resource and Utilization, Southwest Minzu University, Chengdu, China.; Institute of Qinghai-Tibetan Plateau, Southwest Minzu University, Chengdu, China.
Xiong X; Ministry of Education of Key Laboratory of Qinghai-Tibet Plateau Animal Genetic Resource and Utilization, Southwest Minzu University, Chengdu, China.; Institute of Qinghai-Tibetan Plateau, Southwest Minzu University, Chengdu, China.
Liang Q; Novogene Bioinformatics Institute, Beijing, China.
Yao W; Novogene Bioinformatics Institute, Beijing, China.
Mipam TD; Ministry of Education of Key Laboratory of Qinghai-Tibet Plateau Animal Genetic Resource and Utilization, Southwest Minzu University, Chengdu, China.; Institute of Qinghai-Tibetan Plateau, Southwest Minzu University, Chengdu, China.
Zhong J; Ministry of Education of Key Laboratory of Qinghai-Tibet Plateau Animal Genetic Resource and Utilization, Southwest Minzu University, Chengdu, China.; Institute of Qinghai-Tibetan Plateau, Southwest Minzu University, Chengdu, China.
Li J; Ministry of Education of Key Laboratory of Qinghai-Tibet Plateau Animal Genetic Resource and Utilization, Southwest Minzu University, Chengdu, China.; Institute of Qinghai-Tibetan Plateau, Southwest Minzu University, Chengdu, China.
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Źródło :
Integrative zoology [Integr Zool] 2021 Sep; Vol. 16 (5), pp. 685-695. Date of Electronic Publication: 2020 Sep 02.
Typ publikacji :
Journal Article
MeSH Terms :
Biological Evolution*
Genome*
Adaptation, Physiological/*genetics
Cattle/*genetics
Animals ; Bone Development/genetics ; Genome-Wide Association Study
Czasopismo naukowe
Tytuł :
Higher entropy observed in SARS-CoV-2 genomes from the first COVID-19 wave in Pakistan.
Autorzy :
Ghanchi NK; Department of Pathology and Laboratory Medicine, The Aga Khan University (AKU), Karachi, Pakistan.
Nasir A; Department of Pathology and Laboratory Medicine, The Aga Khan University (AKU), Karachi, Pakistan.
Masood KI; Department of Pathology and Laboratory Medicine, The Aga Khan University (AKU), Karachi, Pakistan.
Abidi SH; Department of Biological and Biomedical Sciences, AKU, Karachi, Pakistan.
Mahmood SF; Department of Medicine, AKU, Karachi, Pakistan.
Kanji A; Department of Pathology and Laboratory Medicine, The Aga Khan University (AKU), Karachi, Pakistan.
Razzak S; Department of Pathology and Laboratory Medicine, The Aga Khan University (AKU), Karachi, Pakistan.
Khan W; Department of Pediatrics and Child Health, AKU, Karachi, Pakistan.
Shahid S; Department of Pathology and Laboratory Medicine, The Aga Khan University (AKU), Karachi, Pakistan.
Yameen M; Department of Pathology and Laboratory Medicine, The Aga Khan University (AKU), Karachi, Pakistan.
Raza A; Department of Pathology and Laboratory Medicine, The Aga Khan University (AKU), Karachi, Pakistan.
Ashraf J; Department of Pathology and Laboratory Medicine, The Aga Khan University (AKU), Karachi, Pakistan.
Ansar Z; Department of Pathology and Laboratory Medicine, The Aga Khan University (AKU), Karachi, Pakistan.
Dharejo MB; Department of Health, Government of Sindh, Karachi, Pakistan.
Islam N; Department of Pathology and Laboratory Medicine, The Aga Khan University (AKU), Karachi, Pakistan.
Hasan Z; Department of Pathology and Laboratory Medicine, The Aga Khan University (AKU), Karachi, Pakistan.
Hasan R; Department of Pathology and Laboratory Medicine, The Aga Khan University (AKU), Karachi, Pakistan.; Faculty of Infectious and Tropical Disease, London School of Hygiene and Tropical Medicine, London, United Kingdom.
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Źródło :
PloS one [PLoS One] 2021 Aug 31; Vol. 16 (8), pp. e0256451. Date of Electronic Publication: 2021 Aug 31 (Print Publication: 2021).
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Genome, Viral*
COVID-19/*epidemiology
SARS-CoV-2/*genetics
5' Untranslated Regions/genetics ; COVID-19/virology ; Genetic Variation ; Humans ; Mutation ; Nasopharynx/virology ; Pakistan/epidemiology ; Pandemics ; Phylogeny ; RNA-Dependent RNA Polymerase/genetics ; SARS-CoV-2/classification ; SARS-CoV-2/isolation & purification ; Spike Glycoprotein, Coronavirus/genetics ; Whole Genome Sequencing
Czasopismo naukowe

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