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Tytuł :
Ten simple rules for quick and dirty scientific programming.
Autorzy :
Balaban G; Biomedical Informatics Group, Department of Informatics, University of Oslo, Oslo, Norway.; PharmaTox Strategic Research Initiative, Faculty of Mathematics and Natural Sciences, University of Oslo, Oslo, Norway.
Grytten I; Biomedical Informatics Group, Department of Informatics, University of Oslo, Oslo, Norway.
Rand KD; Institute of Medical Microbiology, Oslo University Hospital, Rikshospitalet, Oslo, Norway.
Scheffer L; Biomedical Informatics Group, Department of Informatics, University of Oslo, Oslo, Norway.
Sandve GK; Biomedical Informatics Group, Department of Informatics, University of Oslo, Oslo, Norway.; PharmaTox Strategic Research Initiative, Faculty of Mathematics and Natural Sciences, University of Oslo, Oslo, Norway.
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Źródło :
PLoS computational biology [PLoS Comput Biol] 2021 Mar 11; Vol. 17 (3), pp. e1008549. Date of Electronic Publication: 2021 Mar 11 (Print Publication: 2021).
Typ publikacji :
Editorial
MeSH Terms :
Software*
Biomedical Research ; Computational Biology ; Humans ; Software Design
Opinia redakcyjna
Tytuł :
ATACdb: a comprehensive human chromatin accessibility database.
Autorzy :
Wang F; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China.
Bai X; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China.
Wang Y; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China.
Jiang Y; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China.
Ai B; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China.
Zhang Y; School of Physics and Electronic Engineering, Northeast Petroleum University, Daqing 163318, China.
Liu Y; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China.
Xu M; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China.
Wang Q; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China.
Han X; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China.
Pan Q; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China.
Li Y; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China.
Li X; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China.
Zhang J; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China.
Zhao J; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China.
Zhang G; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China.
Feng C; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China.
Zhu J; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China.
Li C; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China.
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Źródło :
Nucleic acids research [Nucleic Acids Res] 2021 Jan 08; Vol. 49 (D1), pp. D55-D64.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Databases, Genetic*
Software*
Chromatin/*genetics
Computational Biology/*methods
Chromatin/metabolism ; High-Throughput Nucleotide Sequencing ; Humans ; Molecular Sequence Annotation ; Sequence Analysis, DNA ; Software Design ; Web Browser
Czasopismo naukowe
Tytuł :
Evaluation of a delineation software for cardiac atlas-based autosegmentation: An example of the use of artificial intelligence in modern radiotherapy.
Autorzy :
Loap P; Department of radiation oncology, institut Curie, 26, rue d'Ulm, 75006 Paris, France. Electronic address: .
Tkatchenko N; Department of radiation oncology, institut Curie, 26, rue d'Ulm, 75006 Paris, France.
Kirova Y; Department of radiation oncology, institut Curie, 26, rue d'Ulm, 75006 Paris, France.
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Źródło :
Cancer radiotherapie : journal de la Societe francaise de radiotherapie oncologique [Cancer Radiother] 2020 Dec; Vol. 24 (8), pp. 826-833. Date of Electronic Publication: 2020 Nov 02.
Typ publikacji :
Comparative Study; Journal Article
MeSH Terms :
Artificial Intelligence*
Medical Illustration*
Software Validation*
Heart/*diagnostic imaging
Unilateral Breast Neoplasms/*radiotherapy
Female ; Heart/anatomy & histology ; Heart/radiation effects ; Heart Ventricles/anatomy & histology ; Heart Ventricles/diagnostic imaging ; Humans ; Radiation Injuries/prevention & control ; Software
Czasopismo naukowe
Tytuł :
Evaluation of a software for automatic delineation of the mammary gland and organs at risk in patients treated for breast cancer in lateral position.
Autorzy :
Msika R; Department of Radiation Oncology, institut Curie, 26, rue d'Ulm, 75005 Paris, France.
Tkatchenko N; Department of Radiation Oncology, institut Curie, 26, rue d'Ulm, 75005 Paris, France.
Robilliard M; Department of Radiation Oncology, institut Curie, 26, rue d'Ulm, 75005 Paris, France.
Fourquet A; Department of Radiation Oncology, institut Curie, 26, rue d'Ulm, 75005 Paris, France.
Kirova Y; Department of Radiation Oncology, institut Curie, 26, rue d'Ulm, 75005 Paris, France. Electronic address: .
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Źródło :
Cancer radiotherapie : journal de la Societe francaise de radiotherapie oncologique [Cancer Radiother] 2020 Dec; Vol. 24 (8), pp. 799-804. Date of Electronic Publication: 2020 Oct 09.
Typ publikacji :
Comparative Study; Evaluation Study; Journal Article
MeSH Terms :
Software Validation*
Breast/*diagnostic imaging
Organs at Risk/*diagnostic imaging
Patient Positioning/*methods
Unilateral Breast Neoplasms/*diagnostic imaging
Unilateral Breast Neoplasms/*radiotherapy
Automation ; Female ; Heart/diagnostic imaging ; Humans ; Lung/diagnostic imaging ; Medical Illustration ; Radiation Oncologists ; Software
Czasopismo naukowe
Tytuł :
Forecast UTI: application for predicting intensive care unit beds in the context of the COVID-19 pandemic.
Autorzy :
Salles Neto LL; Universidade Federal de São Paulo, Instituto de Ciência e Tecnologia, São José dos Campos, SP, Brasil.
Martins CB; Universidade Federal de São Paulo, Escola Paulista de Medicina, São Paulo, SP, Brasil.
Chaves AA; Universidade Federal de São Paulo, Instituto de Ciência e Tecnologia, São José dos Campos, SP, Brasil.
Konstantyner TCRO; Universidade Federal de São Paulo, Escola Paulista de Medicina, São Paulo, SP, Brasil.
Yanasse HH; Universidade Federal de São Paulo, Instituto de Ciência e Tecnologia, São José dos Campos, SP, Brasil.
Campos CBL; Universidade Federal de São Paulo, Instituto de Ciência e Tecnologia, São José dos Campos, SP, Brasil.
Bellini AJO; Universidade Federal de São Paulo, Instituto de Ciência e Tecnologia, São José dos Campos, SP, Brasil.
Butkeraites RB; Universidade Federal de São Paulo, Instituto de Ciência e Tecnologia, São José dos Campos, SP, Brasil.
Correia L; Universidade Federal de São Paulo, Instituto de Ciência e Tecnologia, São José dos Campos, SP, Brasil.
Magro IL; Universidade Federal de São Paulo, Instituto de Ciência e Tecnologia, São José dos Campos, SP, Brasil.
Soares FDS; Universidade Federal de São Paulo, Instituto de Ciência e Tecnologia, São José dos Campos, SP, Brasil.
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Transliterated Title :
Forecast UTI: aplicativo para previsão de leitos de unidades de terapia intensiva no contexto da pandemia de COVID-19.
Źródło :
Epidemiologia e servicos de saude : revista do Sistema Unico de Saude do Brasil [Epidemiol Serv Saude] 2020 Sep 25; Vol. 29 (4), pp. e2020391. Date of Electronic Publication: 2020 Sep 25 (Print Publication: 2020).
Typ publikacji :
Journal Article
MeSH Terms :
Betacoronavirus*
Software*
Bed Occupancy/*statistics & numerical data
Coronavirus Infections/*epidemiology
Hospital Bed Capacity/*statistics & numerical data
Intensive Care Units/*statistics & numerical data
Pneumonia, Viral/*epidemiology
Beds/supply & distribution ; Brazil/epidemiology ; COVID-19 ; Decision Making ; Forecasting ; Humans ; Pandemics ; SARS-CoV-2 ; Software Design
Czasopismo naukowe
Tytuł :
STRinNGS v2.0: Improved tool for analysis and reporting of STR sequencing data.
Autorzy :
Jønck CG; Section of Forensic Genetics, Department of Forensic Medicine, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.
Qian X; Section of Forensic Genetics, Department of Forensic Medicine, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark; Institute of Forensic Medicine, West China School of Basic Science & Forensic Medicine, Sichuan University, Chengdu, China.
Simayijiang H; Section of Forensic Genetics, Department of Forensic Medicine, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.
Børsting C; Section of Forensic Genetics, Department of Forensic Medicine, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark. Electronic address: .
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Źródło :
Forensic science international. Genetics [Forensic Sci Int Genet] 2020 Sep; Vol. 48, pp. 102331. Date of Electronic Publication: 2020 Jun 20.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
DNA Fingerprinting*
High-Throughput Nucleotide Sequencing*
Microsatellite Repeats*
Software Design*
Alleles ; Genotype ; Humans ; Sequence Analysis, DNA ; Software
Czasopismo naukowe
Tytuł :
Endothelial dysfunction assessed by digital tonometry and discrepancy between fraction flow reserve and instantaneous wave free ratio.
Autorzy :
Jerabek S; 2nd Department of Medicine - Department of Cardiovascular Medicine, First Faculty of Medicine, Charles University in Prague and General University Hospital in Prague, Prague, Czech Republic.
Zemanek D; 2nd Department of Medicine - Department of Cardiovascular Medicine, First Faculty of Medicine, Charles University in Prague and General University Hospital in Prague, Prague, Czech Republic.
Pudil J; 2nd Department of Medicine - Department of Cardiovascular Medicine, First Faculty of Medicine, Charles University in Prague and General University Hospital in Prague, Prague, Czech Republic.
Bayerova K; 2nd Department of Medicine - Department of Cardiovascular Medicine, First Faculty of Medicine, Charles University in Prague and General University Hospital in Prague, Prague, Czech Republic.
Kral A; 2nd Department of Medicine - Department of Cardiovascular Medicine, First Faculty of Medicine, Charles University in Prague and General University Hospital in Prague, Prague, Czech Republic.
Kopriva K; Cardiology Department, Homolka Hospital, Prague, Czech Republic.
Kawase Y; Gifu Heart Center, Gifu, Japan.
Omori H; Gifu Heart Center, Gifu, Japan.
Tanigaki T; Gifu Heart Center, Gifu, Japan.
Chen Z; Department of Electrical & Computer Engineering and Iowa Institute for Biomedical Imaging, The University of Iowa, Iowa City, IA, USA.
Vodzinska A; Cardiology Department, Trinec Podlesi Hospital, Trinec, Czech Republic.
Branny M; Cardiology Department, Trinec Podlesi Hospital, Trinec, Czech Republic.
Matsuo H; Gifu Heart Center, Gifu, Japan.
Mates M; Cardiology Department, Homolka Hospital, Prague, Czech Republic.
Sonka M; Department of Electrical & Computer Engineering and Iowa Institute for Biomedical Imaging, The University of Iowa, Iowa City, IA, USA.
Kovarnik T; 2nd Department of Medicine - Department of Cardiovascular Medicine, First Faculty of Medicine, Charles University in Prague and General University Hospital in Prague, Prague, Czech Republic.
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Źródło :
Acta cardiologica [Acta Cardiol] 2020 Aug; Vol. 75 (4), pp. 323-328. Date of Electronic Publication: 2019 Apr 04.
Typ publikacji :
Journal Article; Observational Study
MeSH Terms :
Coronary Stenosis*/diagnosis
Coronary Stenosis*/physiopathology
Fractional Flow Reserve, Myocardial*
Laser-Doppler Flowmetry*/instrumentation
Laser-Doppler Flowmetry*/methods
Software Design*
Endothelium, Vascular/*physiopathology
Microcirculation/*physiology
Aged ; Female ; Humans ; Image Processing, Computer-Assisted ; Male ; Manometry/instrumentation ; Manometry/methods ; Myocardial Perfusion Imaging/methods ; Software ; Vascular Resistance
Czasopismo naukowe
Tytuł :
Validation of ThermoHuman automatic thermographic software for assessing foot temperature before and after running.
Autorzy :
Requena-Bueno L; Research Group in Sports Biomechanics (GIBD), Department of Physical Education and Sports, University of Valencia, Valencia, Spain.
Priego-Quesada JI; Research Group in Sports Biomechanics (GIBD), Department of Physical Education and Sports, University of Valencia, Valencia, Spain; Research Group in Medical Physics (GIFIME), Department of Physiology, University of Valencia, Valencia, Spain. Electronic address: .
Jimenez-Perez I; Research Group in Sports Biomechanics (GIBD), Department of Physical Education and Sports, University of Valencia, Valencia, Spain; Research Group in Medical Physics (GIFIME), Department of Physiology, University of Valencia, Valencia, Spain.
Gil-Calvo M; Research Group in Sports Biomechanics (GIBD), Department of Physical Education and Sports, University of Valencia, Valencia, Spain.
Pérez-Soriano P; Research Group in Sports Biomechanics (GIBD), Department of Physical Education and Sports, University of Valencia, Valencia, Spain.
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Źródło :
Journal of thermal biology [J Therm Biol] 2020 Aug; Vol. 92, pp. 102639. Date of Electronic Publication: 2020 Jul 03.
Typ publikacji :
Journal Article
MeSH Terms :
Skin Temperature*
Software Validation*
Image Processing, Computer-Assisted/*methods
Thermography/*methods
Adult ; Female ; Foot/physiology ; Humans ; Male ; Running ; Software ; Young Adult
Czasopismo naukowe
Tytuł :
Empirical study of the relationship between design patterns and code smells.
Autorzy :
Alfadel M; Department of Computer Science and Software Engineering, Concordia University, Montreal, Canada.
Aljasser K; Information and Computer Science Department, King Fahd University of Petroleum and Minerals, Dhahran, Saudi Arabia.
Alshayeb M; Information and Computer Science Department, King Fahd University of Petroleum and Minerals, Dhahran, Saudi Arabia.
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Źródło :
PloS one [PLoS One] 2020 Apr 16; Vol. 15 (4), pp. e0231731. Date of Electronic Publication: 2020 Apr 16 (Print Publication: 2020).
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Software Design*
Data Analysis ; Data Collection/methods ; Programming Languages ; Software/standards ; Software/statistics & numerical data ; Software Validation
Czasopismo naukowe
Tytuł :
Modular Software Architecture for Local Smart Building Servers.
Autorzy :
Lagsaiar L; Civil and Geo-Environmental Engineering Laboratory, Lille University, 42 Rue Paul Duez, 59000 Lille, France.; Laboratory of System Analysis, Information Processing and Industrial Management (LASTIMI), Mohammed V University, Rabat 10000, Morocco.
Shahrour I; Civil and Geo-Environmental Engineering Laboratory, Lille University, 42 Rue Paul Duez, 59000 Lille, France.
Aljer A; Civil and Geo-Environmental Engineering Laboratory, Lille University, 42 Rue Paul Duez, 59000 Lille, France.
Soulhi A; Laboratory of System Analysis, Information Processing and Industrial Management (LASTIMI), Mohammed V University, Rabat 10000, Morocco.
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Źródło :
Sensors (Basel, Switzerland) [Sensors (Basel)] 2021 Aug 29; Vol. 21 (17). Date of Electronic Publication: 2021 Aug 29.
Typ publikacji :
Journal Article
MeSH Terms :
Housing*
Software*
Monitoring, Physiologic
Czasopismo naukowe
Tytuł :
A protocol for accurate radiochromic film dosimetry using Radiochromic.com.
Autorzy :
Méndez I; Department for dosimetry and quality of radiological procedures, Institute of Oncology Ljubljana, Ljubljana, Slovenia.
Rovira-Escutia JJ; Centro Nacional de Dosimetría, INGESA, Valencia, Spain.
Casar B; Department for dosimetry and quality of radiological procedures, Institute of Oncology Ljubljana, Ljubljana, Slovenia.
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Źródło :
Radiology and oncology [Radiol Oncol] 2021 Aug 10; Vol. 55 (3), pp. 369-378. Date of Electronic Publication: 2021 Aug 10.
Typ publikacji :
Journal Article
MeSH Terms :
Software*
Film Dosimetry/*methods
Film Dosimetry/instrumentation ; Humans ; Radiation Dosage ; Uncertainty
Czasopismo naukowe
Tytuł :
Automated Specification-Based Testing of REST APIs.
Autorzy :
Baniaș O; Automation and Applied Informatics Department, Politehnica University of Timisoara, Parvan 2, 300223 Timisoara, Romania.
Florea D; Automation and Applied Informatics Department, Politehnica University of Timisoara, Parvan 2, 300223 Timisoara, Romania.
Gyalai R; Automation and Applied Informatics Department, Politehnica University of Timisoara, Parvan 2, 300223 Timisoara, Romania.
Curiac DI; Automation and Applied Informatics Department, Politehnica University of Timisoara, Parvan 2, 300223 Timisoara, Romania.
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Źródło :
Sensors (Basel, Switzerland) [Sensors (Basel)] 2021 Aug 09; Vol. 21 (16). Date of Electronic Publication: 2021 Aug 09.
Typ publikacji :
Journal Article
MeSH Terms :
Software*
Humans
Czasopismo naukowe
Tytuł :
Can the Monte Carlo method predict the toxicity of binary mixtures?
Autorzy :
Toropova AP; Laboratory of Environmental Chemistry and Toxicology, Istituto Di Ricerche Farmacologiche Mario Negri IRCCS, Via Mario Negri, 2, 20156, Milano, Italy. .
Toropov AA; Laboratory of Environmental Chemistry and Toxicology, Istituto Di Ricerche Farmacologiche Mario Negri IRCCS, Via Mario Negri, 2, 20156, Milano, Italy.
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Źródło :
Environmental science and pollution research international [Environ Sci Pollut Res Int] 2021 Aug; Vol. 28 (29), pp. 39493-39500. Date of Electronic Publication: 2021 Mar 23.
Typ publikacji :
Journal Article
MeSH Terms :
Ecosystem*
Software*
Molecular Structure ; Monte Carlo Method ; Quantitative Structure-Activity Relationship
Czasopismo naukowe
Tytuł :
Code Wisely: Risk assessment and mitigation for custom clinical software.
Autorzy :
Cardan RA; Department of Radiation Oncology, University of Alabama at Birmingham, Birmingham, AL, USA.
Covington EL; Department of Radiation Oncology, University of Alabama at Birmingham, Birmingham, AL, USA.
Popple RA; Department of Radiation Oncology, University of Alabama at Birmingham, Birmingham, AL, USA.
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Źródło :
Journal of applied clinical medical physics [J Appl Clin Med Phys] 2021 Aug; Vol. 22 (8), pp. 273-279. Date of Electronic Publication: 2021 Jul 10.
Typ publikacji :
Journal Article; Review
MeSH Terms :
Software*
Humans ; Risk Assessment
Czasopismo naukowe
Tytuł :
Agreement and Accuracy of Ischemic Core Volume Evaluated by Three CT Perfusion Software Packages in Acute Ischemic Stroke.
Autorzy :
Liu QC; Department of Interventional Radiology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Jia ZY; Department of Interventional Radiology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Zhao LB; Department of Interventional Radiology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Cao YZ; Department of Interventional Radiology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Ma G; Department of Radiology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Shi HB; Department of Interventional Radiology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Liu S; Department of Interventional Radiology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China. Electronic address: .
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Źródło :
Journal of stroke and cerebrovascular diseases : the official journal of National Stroke Association [J Stroke Cerebrovasc Dis] 2021 Aug; Vol. 30 (8), pp. 105872. Date of Electronic Publication: 2021 Jun 18.
Typ publikacji :
Comparative Study; Journal Article
MeSH Terms :
Cerebrovascular Circulation*
Perfusion Imaging*
Radiographic Image Interpretation, Computer-Assisted*
Software*
Tomography, X-Ray Computed*
Ischemic Stroke/*diagnostic imaging
Aged ; Clinical Decision-Making ; Female ; Humans ; Ischemic Stroke/physiopathology ; Ischemic Stroke/therapy ; Magnetic Resonance Imaging ; Male ; Predictive Value of Tests ; Reproducibility of Results ; Retrospective Studies ; Thrombectomy ; Treatment Outcome
Czasopismo naukowe
Tytuł :
DDosTC: A Transformer-Based Network Attack Detection Hybrid Mechanism in SDN.
Autorzy :
Wang H; School of Control and Computer Engineering, North China Electric Power University, No. 2 Beinong Road, Changping District, Beijing 102206, China.
Li W; School of Control and Computer Engineering, North China Electric Power University, No. 2 Beinong Road, Changping District, Beijing 102206, China.
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Źródło :
Sensors (Basel, Switzerland) [Sensors (Basel)] 2021 Jul 26; Vol. 21 (15). Date of Electronic Publication: 2021 Jul 26.
Typ publikacji :
Journal Article
MeSH Terms :
Neural Networks, Computer*
Software*
Aggression ; Algorithms ; Humans ; Internet
Czasopismo naukowe
Tytuł :
PDBeCIF: an open-source mmCIF/CIF parsing and processing package.
Autorzy :
van Ginkel G; European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, UK.
Pravda L; European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, UK.
Dana JM; European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, UK.
Varadi M; European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, UK.
Keller P; Global Phasing Ltd., Sheraton House, Castle Park, Cambridge, CB3 0AX, UK.
Anyango S; European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, UK.
Velankar S; European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, UK. .
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Źródło :
BMC bioinformatics [BMC Bioinformatics] 2021 Jul 23; Vol. 22 (1), pp. 383. Date of Electronic Publication: 2021 Jul 23.
Typ publikacji :
Journal Article
MeSH Terms :
Software*
Databases, Protein ; Europe ; Macromolecular Substances ; Molecular Structure
Czasopismo naukowe

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